TCONS_00011785-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011785-protein
Unique NameTCONS_00011785-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011785-protein ID=TCONS_00011785-protein|Name=TCONS_00011785-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1316bp
MVQTWDRYPSLANLNEVEDINPLRRAYSENHLNNTTVINEGPSTLAVSTN
RTNVGEKIIITWNLSVAPSQKDWLGLYYAEDNNEVLIDKREKQIGKSKIG
SYTWYISKEFKYKEVINVCVFKYFHGGLVKFIASTNVFTICCPLDMLPAQ
TTPPMAIPGVDDLLDVLISGLKAADLKKGFFGKPNPYIKINVLPRVRHLS
AGQKHHGLQWKSSAKQNSSDPVWDEKEFKVSATAADLLEIEVRNKSTRPA
SKFLGKLVFPLSKIIESCGFSRAKRITQYLIGRTTADKIQGTFTFVINVK
KSSSKAQYNYPCLPKRISASNNIENVPPPIPKHVSSLQNGSPITVTPRQR
PVSYHPQLSENNITNSIKQRKRTKRSSSYEEVNFLPRALSPPVESSAPTP
LPPAEPDFVESESEPSTPIEDIHADEPLSAVEHFAHGPLINEVDIPCSVT
DSDVDSLHSADHDYAILEPDNNIIQGEVSDASANGLTGHSNPVDNSQNED
TNLVDVNVIPTLDEATVMTCSASCNGSTTPTIQNTRSHLPEGANMLNIKS
VVNNGLDLLDEESMDPSPTSERSNCDLLQFHSYPSTEEEGASYQEVEGSP
QEEEDEEEEGYVEVAHEFTHDQDEDDLSLASSAEADERYLLGAPVNGEII
RANSCQELLQEELSDNEPPLSSSEQVTKLTPLNAQVKNGRSNSRSRADHY
EAIFLPMNQTPRQEQSNNVENNFDPSQHIVARKKISSAPMSNSPDTIELM
LKPPNKTDPITETPKSSAYPGGARPRDSKNYIKPSAPMKIGLDTSTTQRQ
NWVSXASANGLTGHSNPVDNSQNEDTNLVDVNVIPTLDEATVMTCSASCN
GSTTPTIQNTRSHLPEGANMLNIKSVVNNGLDLLDEESMDPSPTSERSNC
DLLQFHSYPSTEEEGASYQEVEGSPQEEEDEEEEGYVEVAHEFTHDQDED
DLSLASSAEADERYLLGAPVNGEIIRANSCQELLQEELSDNEPPLSSSEQ
VTKLTPLNAQVKNGRSNSRSRADHYEAIFLPMNQTPRQEQSNNVENNFDP
SQHIVARKKISSAPMSNSPDTIELMLKPPNKTDPITETPKSSAYPGGARP
RDSKNYIKPSAPMKIGLDTSTTQRQNWVSFDEAPAVPPHKRTNESLDVTS
TFDEKFATPRLADLESSKLLPNTEPSRPSGGAKPKINPNQITSRTDIPFS
EPIITTDLQTASKKASNNLPQNKTNLLNQALLNEFPPFTTNTTSNPSHAS
STPPTTQLPIPGPRSLTTTTSSIATTIAAVTTTTTPVVDSRSKLTSTKTT
PSTAKSITSTTPSTRX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006611XLOC_006611Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011785TCONS_00011785Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR032348HECW_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 165..273
e-value: 1.4E-8
score: 44.6
IPR000008C2 domainPFAMPF00168C2coord: 171..266
e-value: 9.6E-9
score: 35.4
IPR000008C2 domainGENE3D2.60.40.150coord: 163..298
e-value: 3.1E-12
score: 46.2
IPR000008C2 domainPROSITEPS50004C2coord: 166..258
score: 9.139
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 168..269
IPR032348E3 ubiquitin-protein ligase HECW1/2, N-terminalPFAMPF16562HECW_Ncoord: 37..140
e-value: 2.5E-14
score: 53.0

Blast
[Close]
BLAST of TCONS_00011785-protein vs. Swiss-Prot (Human)
Match: HECW2 (E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens GN=HECW2 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 3.855e-30
Identity = 89/303 (29.37%), Postives = 152/303 (50.17%), Query Frame = 0 
Query:   10 SLANLNEVEDINPLRRAYSENHLNNTTVINEGPSTLAVSTNRTNVGEK--IIITWNLSVAPSQKDWLGLYYAEDNNEV-LIDKREKQIGKSKIGSYTWYISKEFKYKE-VINVCVFKYFHGGLVKFIASTNVFTICCPLDMLPAQTTPPMAIPGVD--DLLDVLISGLKAADLKKGFFGKPNPYIKINVLPRVRHLSAGQKHHGLQWKSSAKQNSSDPVWDEKEFKVSATAADLLEIEVRNK--STRPASK-FLGKLVFPLSKIIESCGFSRAKRITQYLIGRTT-ADKIQGTFTFVINVKKS 302
            SLA  + + +   L+RA S+  L    V +E  S+L  S     +G+   +II W++       DW+GLY+ ++N+     D + + +  ++ G   W I     + E  I +C FKY+HG      A+T   T+  P  M+ A+     A   +    L+   +S L+A  LKKG F  P+PY+K+++ P  +       HHG + +S+   N+++P+W  +++   A   D+LEIE+++K   +RP  K FLGKL  P+ +++E        ++  Y +GR   AD + G   F + V  S
Sbjct:   30 SLAAQSSMPENMTLQRANSDTDL----VTSESRSSLTASMYEYTLGQAQNLIIFWDIKEEVDPSDWIGLYHIDENSPANFWDSKNRGVTGTQKGQIVWRIEPGPYFMEPEIKIC-FKYYHGISGALRATTPCITVKNPAVMMGAEGMEGGASGNLHSRKLVSFTLSDLRAVGLKKGMFFNPDPYLKMSIQPGKKSSFPTCAHHGQERRSTIISNTTNPIWHREKYSFFALLTDVLEIEIKDKFAKSRPIIKRFLGKLTIPVQRLLERQAI--GDQMLSYNLGRRLPADHVSGYLQFKVEVTSS 325
The following BLAST results are available for this feature:
BLAST of TCONS_00011785-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HECW23.855e-3029.37E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens ... [more]
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