TCONS_00011749-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011749-protein
Unique NameTCONS_00011749-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length254

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011749-protein ID=TCONS_00011749-protein|Name=TCONS_00011749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
MMNHLKDYHTRNGVLNFLTYADEYAIGYFKKQGFSKSIGLNRTDYTGYIK
EYEGATLMHCHLNVQIPYREFSLVIKKQKEIIRQLIKDRQAEIKQIYPGL
KCFKNGVSEIPIFSIPGIENTGWKHMQKDSTDFELESSEHQDALQNILTA
VQNHASAWPFLSPVPRDEVPDYYDVIKYPMDLKKIRERLESGYYSSKKLF
VADMSRIFANCRTYNGPDTEYFRCAGVVERFFSSKMKEFYNGQLQEKKVK
LKPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006600XLOC_006600Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011749TCONS_00011749Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR018359Bromodomain_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 155..168
score: 37.58
coord: 203..222
score: 35.33
coord: 185..203
score: 34.9
coord: 169..185
score: 55.88
IPR001487BromodomainSMARTSM00297bromo_6coord: 133..241
e-value: 3.1E-42
score: 156.3
IPR001487BromodomainGENE3D1.20.920.10coord: 119..253
e-value: 1.7E-40
score: 137.7
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 144..225
e-value: 2.1E-25
score: 88.5
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 152..222
score: 22.035
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 135..241
NoneNo IPR availableGENE3D3.40.630.30coord: 1..68
e-value: 2.0E-8
score: 33.5
NoneNo IPR availableCDDcd05509Bromo_gcn5_likecoord: 139..239
e-value: 3.90515E-52
score: 165.806
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 157..214

Blast
[Close]
BLAST of TCONS_00011749-protein vs. Swiss-Prot (Human)
Match: KAT2B (Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3)

HSP 1 Score: 291.582 bits (745), Expect = 3.319e-93
Identity = 141/238 (59.24%), Postives = 189/238 (79.41%), Query Frame = 0 
Query:    1 MMNHLKDYHTRNGVLNFLTYADEYAIGYFKKQGFSKSIGLNRTDYTGYIKEYEGATLMHCHLNVQIPYREFSLVIKKQKEIIRQLIKDRQAEIKQIYPGLKCFKNGVSEIPIFSIPGIENTGWKHMQKDSTDFELESSEHQDALQNILTAVQNHASAWPFLSPVPRDEVPDYYDVIKYPMDLKKIRERLESGYYSSKKLFVADMSRIFANCRTYNGPDTEYFRCAGVVERFFSSKMKE 238
            +MNHLK+YH ++ +LNFLTYADEYAIGYFKKQGFSK I + +T Y GYIK+YEGATLM C LN +IPY EFS++IKKQKEII++LI+ +QA+I+++YPGL CFK+GV +IPI SIPGI  TGWK   K+ +    +  +    L++IL  V++H SAWPF+ PV R E P YY+VI++PMDLK + ERL++ YY SKKLF+AD+ R+F NC+ YN P++EY++CA ++E+FF SK+KE
Sbjct:  589 LMNHLKEYHIKHDILNFLTYADEYAIGYFKKQGFSKEIKIPKTKYVGYIKDYEGATLMGCELNPRIPYTEFSVIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKDGVRQIPIESIPGIRETGWKPSGKEKSKEPRDPDQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKE 826
The following BLAST results are available for this feature:
BLAST of TCONS_00011749-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KAT2B3.319e-9359.24Histone acetyltransferase KAT2B OS=Homo sapiens GN... [more]
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