|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011631-protein ID=TCONS_00011631-protein|Name=TCONS_00011631-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1648bp
IILSYSRLNHCMFCKDTIPMIPLPFLSVNKEHTCLLGLKFKECKKQNKND
SLIKINFKIMNGNKGIGKSRKRTPSKKHGIENLRRSPRKKEESNEKGRRK
LDFNKDKKRLKDIVVFVNVQNNASRQKEIIDRVIALGGKTEEFFDRNVKL
VVTTVPKPVEKANNGEQAENSPLSAGRPSPSPQAVLSNKNSMKFSPYSTD
SPQMSVEAGRRDSRSMSRSYSLMSKVLSNRKGAGTSNVWEKAKICGAKVI
SADEFVRKYMPRKSNSESNMKALKEKSFTNNAKSMSTSTRIVADVKVTKS
TPPCFKIEDKTFAFRPVLHEFKEWPVIYYKTSLTQTPFDVPKVKSKSKSK
SKVKLETPKEQPSSKDEEETISLAVRSDKLSEEEQVQEEEKEKEITKRKC
DIKKDGGGERPGYCDCCSLRYKDLNKHLRSDHHRKFARDSNNFKQLDKLI
GQGTNFLAFVNDLKTIAKLDHLSKKETRTTAVPSNKASTKYASSTKAQST
ITTVSQASTTSTTVSKLPLPRLRSPLKRNSPSTKGAPTTNNHVTEVLTQQ
QTSLPCSPIKHDSPLKKHLILSPRRSPRINHHFPPPTATTILHANSPLRT
PTLDASPIKPDTAFSFPNVSSPSKLETSVTALSTITSFPMVSTPAKLEIT
TTVNSPSRLCNVSNISTPLDSSTRPITSILQPPDNTNHIAKPLKDCSVTD
QVKTPDKPIRKVKRTRKRNSHRSSQLSTIDTQEELANENEDENSPRDEIP
PNNENVSLDESAPIDILHRTSNSFYAHRDDPEIIFNTKQNPILEKLLTPT
RILKSQVQPVDPSKSVSRIIRLDEETTKDDTELNETDILMKSFVDENFSN
DEDKYVKSEPKSEPCLLGFDPETDGCVECEIENCDADHVLKSAPPEEVQA
DEMPNSEVVPFDLKENDEHNIQVKSLDGETKDVNENRDFETVPSPQCGIE
QIEKQEPISVNDNNDVIKTNEHFHAENKVDQSSDQEMFEFSDENVDENDQ
PNNLSRIINNPEYEKNLKKLNAKGVGVEDFQLVDDISVAIFKQGTTPKRG
CKTRSRFSSSTSSKQQLSPPVTNVKTPSKRRTTKDQQALSSPFLLRQSPR
LRKNSSSEQSLPVTSFKRNLRTPTKLVEDVDQYHQFSPFKGVLRTRQKKS
SSEKSQPAVSFKKRRATTPVTPSNRKRSRTISCESLPVNHGNEIAEDAEV
PQIEMDVDDTVFEENVKPPSQASTFNDDGVDSRLDELEQVLLSSGTDMPL
LPRKDSIIPIDETLIDRKCSEIEKETLPKSTPPIVRKARSRSRRTDSERS
VVSCDDDGVSQQNMEFEKEMVLNFGQSMFDRIKNNRRSSKTSSVESSSRS
TSPAMTKKRSKSEKTKTTRREIDKAGASSEMPKPRLPTRSSPRKRDRMLS
SEWTSSPGHSGDLKLTFVKKKKTPFEKPNVENKNTSVLDEFEQGLDLQTL
DDTLKSSGKKSATKIKRVSQKQRGLTDETENVIEENTRSTIRPSRRCKSA
VSRGHYCDYDTDELPSPRKQRNVKTCSKKKSNVKDISFNDGVFSETIVDL
DNTISPKQSRRSKSASKKPIDNDTSKYSESNRQKRDNKSKKATDKTNEVD
VTDPTGTRLGRKCKILSKVIYQESVYDFDDHDVDFSDTQRFRRHKKTP Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 379..399 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 478..540 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 375..394 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1047..1117 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1554..1608 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1334..1414 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1141..1178 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1274..1310 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 341..370 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 161..215 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 665..761 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1491..1529 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 64..103 |
| IPR006572 | Zinc finger, DBF-type | SMART | SM00586 | 3039neu | coord: 407..455
e-value: 2.0E-14
score: 63.9 |
| IPR006572 | Zinc finger, DBF-type | PFAM | PF07535 | zf-DBF | coord: 410..452
e-value: 4.7E-17
score: 61.7 |
| IPR006572 | Zinc finger, DBF-type | PROSITE | PS51265 | ZF_DBF4 | coord: 407..456
score: 20.166 |
| IPR001357 | BRCT domain | GENE3D | 3.40.50.10190 | | coord: 68..258
e-value: 8.8E-4
score: 19.0 |
Blast
The following BLAST results are available for this feature:
|
