TCONS_00011588-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011588-protein
Unique NameTCONS_00011588-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011588-protein ID=TCONS_00011588-protein|Name=TCONS_00011588-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MGDSEETLFNNIIGDMKNMGPLWEDLYVKASKFYGAIKQTAITADAFLES
FQKVADATNNSKGSTRDIGISFGKIVFRHKQIEYKLKAYVGVLADNFLTP
LQEAVDEWKKTNSLLEKDHAKDYKKVKGDLKKANADVAKLKKKASKKVGK
QEYTDQFREAMRVANSICKTLEDQERSYLEKVMVEERKRAAQFFQFYKPV
MDQELTLISEIEQLQSIVDETTLKCQQPTELPETAKDIIKDYKVPEYLRP
GNRESNSGPSPPSSPPIVKDRSLSVSSNSSKGSLTRSATLPSNYSKGGPD
PVPVNMPRLGHNSRSSSRSSFSSSSSLDHANNMPVFDPVTLEELQTPTNG
HHHHRHDSLGQIDEYITNGEDLNATLE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006491XLOC_006491Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011588TCONS_00011588Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013606I-BAR_dom
IPR027267AH/BAR-dom
Vocabulary: Biological Process
TermDefinition
GO:0007009plasma membrane organization
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007009 plasma membrane organization
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableGENE3D1.20.1270.60coord: 2..241
e-value: 1.6E-44
score: 151.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..333
IPR013606IMD/I-BAR domainPFAMPF08397IMDcoord: 10..232
e-value: 2.1E-45
score: 154.7
IPR013606IMD/I-BAR domainPROSITEPS51338IMDcoord: 1..155
score: 14.314
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 6..243

Blast
[Close]
BLAST of TCONS_00011588-protein vs. Swiss-Prot (Human)
Match: MTSSL (MTSS1-like protein OS=Homo sapiens GN=MTSS1L PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.368e-61
Identity = 95/241 (39.42%), Postives = 156/241 (64.73%), Query Frame = 0 
Query:    8 LFNNIIGDMKNMGPLWEDLYVKASKFYGAIKQTAITADAFLESFQKVADATNNSKGSTRDIGISFGKIVFRHKQIEYKLKAYVGVLADNFLTPLQEAVDEWKKTNSLLEKDHAKDYKKVKGDLKKANADVAKLKKKASKK-VGKQEYTDQFREAMRVANSICKTLEDQERSYLEKVMVEERKRAAQFFQFYKPVMDQELTLISEIEQLQSIVDETTLKCQQPTELPETAKDIIKDYKVPEY 247
            LF  I+ DMK+  P+WED   KA+K +  ++ T + A AFL++FQKVAD   N++G+TRDIG +  ++  RH+ IE KL+ +   L ++ + PLQE +++WKK  + L+KDHAK+YK+ + ++KK ++D  KL+KKA K+ +GK +   Q   A++  N +   LE+ E+  + + ++EER R   F  F +PV++ ELT++ EI  LQ I+D+  +   +P +LP  ++ +IKD K  +Y
Sbjct:   14 LFQAIVNDMKSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGATRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKAANQLDKDHAKEYKRARHEIKKKSSDTLKLQKKARKELLGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNGELTMLGEITHLQGIIDDLVVLTAEPHKLPPASEQVIKDLKGSDY 254
The following BLAST results are available for this feature:
BLAST of TCONS_00011588-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTSSL2.368e-6139.42MTSS1-like protein OS=Homo sapiens GN=MTSS1L PE=1 ... [more]
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