TCONS_00011490-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011490-protein
Unique Name	TCONS_00011490-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	367

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011490-protein ID=TCONS_00011490-protein|Name=TCONS_00011490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MGVCKCXFYHSFIHHLVKSKKMGVCKCKQRNVTNQFCYGCRVNVCESCMI
KDHQRCIIKSYVHWLQDSDFSATCSLCLESIDKGEVIRLTCYDLFHWDCF
NAWALKLPESTPKTGYTCPDCKAQIFPPKALVSPIADVLRQKFSTVGWGR
KGLGLPLQTHEQTSPRPTTPVLSDTHQQVSSTPKSSYKPLASVTPFVPLS
NKQQQKIEQHNAYQTQQNLSNTQQHQQTHDTKPSQQSSMFSRDKYPTEGT
LSRKQAPTTRYEESKINLSFDHDENKYKRKGFMHWLSNMMRLWKKPGEIK
KEANMTYKRVFIALVLFTLIFMTVIYFMSALGGRVAENDPLLDPDLNRFV
KVGNNHIGGVGGQDLTM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006435	XLOC_006435	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011490	TCONS_00011490	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 73..122 e-value: 1.5E-6 score: 28.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 74..122 score: 10.276
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 57..239 e-value: 1.3E-11 score: 43.7
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 71..133

Blast

[Close]

BLAST of TCONS_00011490-protein vs. Swiss-Prot (Human)
Match: ZFPL1 (Zinc finger protein-like 1 OS=Homo sapiens GN=ZFPL1 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 3.028e-63
Identity = 125/340 (36.76%), Postives = 170/340 (50.00%), Query Frame = 0

Query:   22 MGVCKCKQRNVTNQFCYGCRVNVCESCMIKDHQRCIIKSYVHWLQDSDFSATCSLCLESIDKGEVIRLTCYDLFHWDCFNAWALKLPESTPKTGYTCPDCKAQIFPPKALVSPIADVLRQKFSTVGWGRKGLGLPLQTHEQTSPRPTTPVLSD----THQQVSSTPKSSYKPLASVTPF----VPLSNKQQQKIEQHNAYQTQQNLSNTQQHQQTHDTKPSQQSSMFSRDKYPTEGTLSRKQAPTTRYEESKINLSFDHDENKYKRKGFMHWLSNMMRLWKKPGEIKKEANMTYKRVFIALVLFTLIFMTVIYFMSALGGRVAENDPLLDPDLNRFVKVG 353
            MG+CKC +R VTN FC+  RVNVCE C++ +H +CI++SY+ WLQDSD++  C LC   +   E  RL CYDLFHW C N  A +LP +T   GY CP C   IFPP  L  P+A  LR+K +TV W R GLGLPL   E  SP P     SD    +    SSTP       AS  P      P       + EQH           T   ++ +DT          RD   T G                  L  D D++KY+R+  + WL+ ++R   + G  K+   +  +   + L+L  L F+ ++  MS LG   A++DP LDP +N  ++VG
Sbjct:    1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPLASRETTRLVCYDLFHWACLNERAAQLPRNTAPAGYQCPSCNGPIFPPTNLAGPVASALREKLATVNWARAGLGLPL-IDEVVSPEPEPLNTSDFSDWSSFNASSTPGPEEVDSASAAPAFYSQAPRPPASPGRPEQHTVIHMGNPEPLTHAPRKVYDT----------RDDDRTPG------------------LHGDCDDDKYRRRPALGWLARLLR--SRAGSRKRPLTLLQR-AGLLLLLGLLGFLALLALMSRLGRAAADSDPNLDPLMNPHIRVG 308

The following BLAST results are available for this feature:

BLAST of TCONS_00011490-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011490-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZFPL1	3.028e-63	36.76	Zinc finger protein-like 1 OS=Homo sapiens GN=ZFPL...	[more]

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TCONS_00011490-protein (polypeptide) - C. hemisphaerica