TCONS_00011468-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011468-protein
Unique NameTCONS_00011468-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011468-protein ID=TCONS_00011468-protein|Name=TCONS_00011468-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MVEDNILKGNIFCLANVDAEKVLNSLEDDENPSPEIIGRKRKRLDDFTPQ
EKMIRRKLKNRVAAQNARDRKKERLEQLEHIVDRLEKENKELKKSNDELR
TNMTFLMSQNKTMRLKLGMSDGDFEQPKTLNITQSPIITPTVGDHDHIVI
KKEEETDTEYASLGRISLQQKLQVLLVSLVTMWLANPRLANCLTSLNESE
QEVVVKYLLQKKLILQKSNVSNKKVQLIQLLLQMNLIPIIQNCLPKTPLN
YFPSAKKSKTLWMDPAIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006426XLOC_006426Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011468TCONS_00011468Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..109
NoneNo IPR availableGENE3D1.20.5.1000coord: 69..175
e-value: 1.3E-5
score: 24.6
NoneNo IPR availableGENE3D1.10.880.10coord: 35..68
e-value: 3.0E-7
score: 30.4
NoneNo IPR availableCDDcd14691bZIP_XBP1coord: 50..100
e-value: 1.64125E-17
score: 73.0111
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 52..108
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 48..112
e-value: 6.4E-15
score: 65.6
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 52..110
e-value: 4.7E-12
score: 45.7
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 55..70
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 50..113
score: 12.047

Blast
[Close]
BLAST of TCONS_00011468-protein vs. Swiss-Prot (Human)
Match: XBP1 (X-box-binding protein 1 OS=Homo sapiens GN=XBP1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.032e-18
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 0 
Query:   38 GRKRKRLDDFTPQEKMIRRKLKNRVAAQNARDRKKERLEQLEHIVDRLEKENKELKKSNDELRTNMTFLMSQNKTMRLKLGM 119
             RKR+RL   +P+EK +RRKLKNRVAAQ ARDRKK R+ +LE  V  LE+EN++L   N  LR     L+ +N+ +R +LGM
Sbjct:   58 ARKRQRLTHLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRLGM 139
The following BLAST results are available for this feature:
BLAST of TCONS_00011468-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XBP13.032e-1852.44X-box-binding protein 1 OS=Homo sapiens GN=XBP1 PE... [more]
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