TCONS_00011459-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011459-protein
Unique NameTCONS_00011459-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length372

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011459-protein ID=TCONS_00011459-protein|Name=TCONS_00011459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MVKTWYFFSKMRQNCTTTSSKINLPSLLCLAYCLLLSSFTLKFPGQRSKN
IFRLVCGGGARPTNTFDMKLLWSGASKRNMRSVSIGGAGLIVGTALSVII
PEGVHAMYDSVLPHNHGHGHESHAHGHAHTHQKRSLQQTNEQKQLIIDNN
SPSGAWENFNSRLPGLPEVELHSMIGISLSLGFIFMLLVDQLFGGGHSHG
GSDGGNRKSATATLGLLVHAAADGIALGAAASTTRSDIEMIVFFAIMLHK
APAAFGLSSFLLHENMERNRIRKHLLAFSLAAPIFSMLTYYGLSASGKQT
FTSYNGTGLAMLFSAGTFLYVATVHILPELLSQPSNSLDNSSQTHGKLTR
KELCYLVIGIFTPVILGLYHKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006421XLOC_006421Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011459TCONS_00011459Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003689ZIP
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0046873 metal ion transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003689Zinc/iron permeasePFAMPF02535Zipcoord: 122..366
e-value: 4.4E-26
score: 91.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..139

Blast
[Close]
BLAST of TCONS_00011459-protein vs. Swiss-Prot (Human)
Match: S39A9 (Zinc transporter ZIP9 OS=Homo sapiens GN=SLC39A9 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 4.515e-86
Identity = 144/301 (47.84%), Postives = 196/301 (65.12%), Query Frame = 0 
Query:   76 SKRNMRSVSIGGAGLIVGTALSVIIPEGVHAMYDSVLPHNHGHGHESHAHGHAHTHQKRSLQQTNEQKQLIIDNNSPSGAWENFNSRLPGLPEVELHSMIGISLSLGFIFMLLVDQLFGGGHSHGGSDGGNRKSA----TATLGLLVHAAADGIALGAAASTTRSDIEMIVFFAIMLHKAPAAFGLSSFLLHENMERNRIRKHLLAFSLAAPIFSMLTYYGLSASGKQTFTSYNGTGLAMLFSAGTFLYVATVHILPELLSQPSNSLDNSSQTHGKLTRKELCYLVIGIFTPVILGLYHKH 372
            S+  ++ V++ GAGL+ GTAL+VI+PEGVHA+Y+ +L   H    E+H    +    ++S+   +E                            +LH+ IG+SL LGF+FMLLVDQ+ G  H H   D    +S+    T TLGL+VHAAADG+ALGAAAST+++ +++IVF AIMLHKAPAAFGL SFL+H  +ERNRIRKHLL F+LAAP+ SM+TY GLS S K+  +  N TG+AMLFSAGTFLYVATVH+LPE+     +   +++   G L+R E+  LV+G   P+IL + H+H
Sbjct:   31 SEERLKLVTVLGAGLLCGTALAVIVPEGVHALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSH----------------------DHTQLHAYIGVSLVLGFVFMLLVDQI-GNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFVAIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEVNATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRG-LSRLEVAALVLGCLIPLILSVGHQH 307
The following BLAST results are available for this feature:
BLAST of TCONS_00011459-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S39A94.515e-8647.84Zinc transporter ZIP9 OS=Homo sapiens GN=SLC39A9 P... [more]
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