TCONS_00011439-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011439-protein
Unique NameTCONS_00011439-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011439-protein ID=TCONS_00011439-protein|Name=TCONS_00011439-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
AKIATESGGRRNFSKKLSCIKASTFSFPSSGLPSKKMADVRKDEKTNIQV
GIRVRPCIKRELESHKKIVMKTNENRIFSTANDKPAISYQFDKVFGEAIS
TEQIYETLGSPIVEYVVAGFHGTLLAYGQTASGKTHTIMGDPGDEGIIPR
ALKDLFHNIHKCENREFLIRASYLEIYNEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006418XLOC_006418Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011439TCONS_00011439Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 45..180
e-value: 4.8E-9
score: -82.9
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 53..179
e-value: 1.5E-34
score: 119.3
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 39..180
e-value: 5.1E-43
score: 146.6
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 47..180
score: 44.647
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 38..179

Blast
[Close]
BLAST of TCONS_00011439-protein vs. Swiss-Prot (Human)
Match: CENPE (Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.921e-32
Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 0 
Query:   48 IQVGIRVRPCIKRE--LESHKKIVMKTNENRIFSTANDKPAISYQFDKVFGEAISTEQIYETLGSPIVEYVVAGFHGTLLAYGQTASGKTHTIMGDPGDEGIIPRALKDLFHNIHKCENREFLIRASYLEIYNEV 180
            + V +RVRP   RE  L    ++  KT+ N I+     K   S+ FD+VF    +T+ +YE + +PI++  + G++GT+ AYGQTASGKT+T+MG     G+IPRA+ D+F  I K  +REFL+R SY+EIYNE 
Sbjct:    7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSK---SFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNET 138
The following BLAST results are available for this feature:
BLAST of TCONS_00011439-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CENPE1.921e-3244.44Centromere-associated protein E OS=Homo sapiens GN... [more]
back to top