TCONS_00011360-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011360-protein
Unique NameTCONS_00011360-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length308

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011360-protein ID=TCONS_00011360-protein|Name=TCONS_00011360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
MATLHPLVLLAILLGSFLQNVTTDDINNLKSQXKGLTAHVLRANQEIQIL
KTKDRTRNTYCQVTSALCGNCLCVEDYNLVEKFYCDCRNKPKVRDCKAHY
ENGERINGLYLIHNDIKGAVVQVFCDQNDDKGGWTVIQRRVDGSTNFQRN
WNAYKNGFGQLQREFWLGNHHIHQLTAQAFLRGTTVRFDMIRRSDSKKVW
AKYSTFSVNAEATKYQLAISGYSGIAGDHMRKHSGNKFSTFDQDNDDYSS
DNCASSNDGAWWFYGCHMVNLNGAFDALLNQHRWHAIWWGSDYDDGRMMF
SEIKVRRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006369XLOC_006369Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011360TCONS_00011360Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..32
NoneNo IPR availableCOILSCoilCoilcoord: 34..46
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 91..308
e-value: 4.9E-68
score: 242.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 93..290
e-value: 3.4E-57
score: 193.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 87..308
score: 45.154
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 94..307
e-value: 8.61109E-75
score: 230.205
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 90..292
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 19..236
e-value: 1.2E-58
score: 197.7
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 237..298
e-value: 8.2E-18
score: 63.8

Blast
[Close]
BLAST of TCONS_00011360-protein vs. Swiss-Prot (Human)
Match: TENA (Tenascin OS=Homo sapiens GN=TNC PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 2.733e-46
Identity = 88/217 (40.55%), Postives = 121/217 (55.76%), Query Frame = 0 
Query:   91 PKVRDCKAHYENGERINGLYLIH-NDIKGAVVQVFCDQNDDKGGWTVIQRRVDGSTNFQRNWNAYKNGFGQLQREFWLGNHHIHQLTAQAFLRGTTVRFDMIRRSDSKKVWAKYSTFSVNAEATKYQLAISGYSGIAGDHMRKHSGNKFSTFDQDNDDYSSDNCASSNDGAWWFYGCHMVNLNGAFDALLNQHRWHAIWWGSDYDDGRMMFSEIKVR 306
            P  +DC     NG+  +GLY I+ N  K   ++VFCD   D GGW V  RR +G  NF +NW AY  GFG  + EFWLG  +++++TAQ       +R D+  R   +  +A Y  FSV    T+Y+L + GYSG AGD M  H+G  FSTFD+D D  +  NCA S  GA+W+  CH VNL G +    N H     W+     +  + F+E+K+R
Sbjct: 1979 PFPKDCSQAMLNGDTTSGLYTIYLNGDKAEALEVFCDMTSDGGGWIVFLRRKNGRENFYQNWKAYAAGFGDRREEFWLGLDNLNKITAQG---QYELRVDL--RDHGETAFAVYDKFSVGDAKTRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDS-AITNCALSYKGAFWYRNCHRVNLMGRYGD--NNHSQGVNWFHWKGHEHSIQFAEMKLR 2187
The following BLAST results are available for this feature:
BLAST of TCONS_00011360-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENA2.733e-4640.55Tenascin OS=Homo sapiens GN=TNC PE=1 SV=3[more]
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