TCONS_00011348-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011348-protein
Unique NameTCONS_00011348-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length283

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011348-protein ID=TCONS_00011348-protein|Name=TCONS_00011348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MGSSLENDMVCLLESIQCLGNDKSQIIQALEHLAEMVLQDEGATIFYKLN
GISLIHKLAFQKKTTSSIVQKALILLGNSSLSNYENKNALCNDQIMDYLK
NKIFGDPPNSKMIASGSYFIACLCSANDKVQNKARNSKLLDKLVLLYRSF
HPKGEIQNNVSKEQWFEKASSNCPVVLTHISHALKSLMNKPRNVENQIVC
SRLLNLALSTLASGKYAEDARIEALQFIADCLYENEKTQNIFNMIGGMRI
LSQVLKTEMKNECDNKAKRNLELTKTLLDTVTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006362XLOC_006362Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011348TCONS_00011348Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 166..283
e-value: 5.6E-5
score: 22.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..164
e-value: 6.6E-7
score: 28.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 22..257

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011348-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top