TCONS_00011309-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011309-protein
Unique NameTCONS_00011309-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length496

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011309-protein ID=TCONS_00011309-protein|Name=TCONS_00011309-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MIINFSVVETHFLSWCTXPECTAELQIDLNDCPGNTTRKLEKYNALPICH
DNTNPICRVKRRFFVTDAKPFSTILVPRFFMGEIFPLCCSCKSKFYNGTG
LRSNKETGNVRYYNNNTEMFGDYRNITKDVGIFDIILPIFGSTSATKLYG
LPFTPMFEMSEAVFMTNHLTSEERLAKLLLGLYTLVPLLLICLLLSFIAG
AVGWLLETRKNTDEFSRVFHEGIFDGFWWSFVSMTTVGYGDKAPKSLFGR
IFSVIWILAGITICSMLTASLTSVVTDAADSTPKTLESGDKVGVLNHRMF
EVSLAIEKGAIPVKFDSVDDMLKEMKKPTEEIGIAGILVDPYLRSLDPNR
WTSFQKSTVVWQSSSVSYGALFSSDADQNFFGEAIKDNRLAMKSCLMYSG
LMLASDLTSEDSSNGLLSFENELFIPFLAVCLGVVLFVCILGTGHECMNK
LKKKMKIDSEVDLRKQDGDTNQMKVNVPNSTRKDKDEIKANVTPFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006337XLOC_006337Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011309TCONS_00011309Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR001320Iontro_rcpt
IPR013099K_chnl_dom
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006813 potassium ion transport
cellular_component GO:0016020 membrane
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0004970 ionotropic glutamate receptor activity
molecular_function GO:0005249 voltage-gated potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028325Voltage-gated potassium channelPRINTSPR00169KCHANNELcoord: 249..275
score: 17.95
coord: 220..242
score: 55.8
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 202..277
e-value: 8.5E-8
score: 32.1
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 192..276
e-value: 2.0E-15
score: 56.4
NoneNo IPR availableGENE3D1.10.287.70coord: 177..341
e-value: 3.9E-26
score: 90.9
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 182..275

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011309-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top