TCONS_00011271-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011271-protein
Unique NameTCONS_00011271-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1240

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011271-protein ID=TCONS_00011271-protein|Name=TCONS_00011271-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1240bp
YNKKLTQIILTSRARRMTEENENVPPDNTDGSVSIDVPDGYENKAYTPEY
IMEDVPRKTEVNGNNVATESNGKVIDDGASSSSNNEGNDLRSQSVVSVSQ
LFRYASTTDWVFMFFASISACINGVLQPVSFIIFGELINDFVDEDSGKTI
DLNKEMEKFGIYYVYIGLGAIVFGYFQNMLWLRASINQAFRIRTLAFESI
LKQDIGFFDTNDAGELSSRLADGVTKVQNGIGDKIGSLQHAIAMLVGGII
IGFIYGWKLTLVIIAMSPLLFIGAFATGKVIGMITSQEQTSYAKAGSIAE
EVLSSIRTVVAFGSERKEIDRYRVNLKDAEKAGIRKGLSTGFAFALFNST
LFGCMALGFWYGGTLIGDGEINAGDLLIVFFSVMIGANQFGQVGPNIEAF
SSARGAAYTIFKLIERKPVIDSLTDAGEKTKIEGDIKFVDCQFSYPSRPD
IKILRGLNLNIKPGTTCALVGESGCGKSTTVKLIQRFYDAAGGRVQIDGV
DIKRINVKHLRKHIGVVSQEPVLFDASIKKNILMGHPEATEDMVIEAAKN
ANAHDFISKLPQGYDTNVGEGGAQLSGGQKQRIAIARALVRDPKILLLDE
ATSALDTGSEAIVQAALDKASLGRTTVIIAHRLSTVKNADSIAVVSAGQV
SELGSHKELMDKRGEYFKLVMLQNFEEQEEEELNSELGSVISESEREEII
ARKMMRSLSQLSNTGSETDQQLVKELIDREITHRKSIRRVKSTVGTQKQV
SKLDRQLSQTKEVKEEELPEDEPVQIPPISRILKLNAKEWPYIVTGIFFS
AIAGTMPVLFAIILAEILQSFAENDPQEMEKKMEFWAIMFMVIGLVIGVA
FFIAQYLFAKAGEALTTRLREMAFTSLLRQEIGYFDLPQHSTGALSARLS
ADASAVQGATSTRLNTLTQVVVTGLSSLIVAFAYSWQLSLLVLAFVPFIA
MFGAIQTSLNTSFAGDAQKKLSQAGAISTEAIMQIRTVASLGKEDFFFDK
YKSLLMGPTQGSRKGAHIYGIAYGFSIGVMLFSNGACFRLGGYLAERDGL
SLSSIVKVIIGIQFGAMTAGQVASFAPDYVKAKTAAGRILALFDRKPAID
SYSTEGIKNEIKGDITFTDVEFTYPTRQNVPILQKLNIKIPRGRTVAFVG
ASGCGKSTSVSLLERFYEVAGGEVLIDDIPIKDYNIRALRSQIGIVQQEP
VLFDRSIRDNILYGIEDPSQITQEQIEEACRNSNIHHVIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006318XLOC_006318Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011271TCONS_00011271Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 1142..1222
e-value: 6.9
score: 5.2
coord: 463..635
e-value: 8.6E-17
score: 71.8
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 114..387
e-value: 1.3E-72
score: 244.7
coord: 795..1066
e-value: 1.9E-53
score: 181.8
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 794..1081
score: 43.831
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 114..402
score: 52.481
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 101..421
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 778..1097
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 1133..1235
e-value: 2.1E-16
score: 60.6
coord: 454..603
e-value: 1.0E-37
score: 129.6
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 436..672
score: 25.41
NoneNo IPR availableGENE3D1.20.1560.10coord: 774..1104
e-value: 2.0E-62
score: 210.5
coord: 92..422
e-value: 4.2E-78
score: 262.1
NoneNo IPR availableGENE3D3.40.50.300coord: 1112..1240
e-value: 3.2E-31
score: 108.2
NoneNo IPR availableGENE3D3.40.50.300coord: 423..679
e-value: 1.4E-76
score: 256.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 748..771
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..40
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 436..671
e-value: 4.08155E-137
score: 418.481
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 575..589
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 430..673
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1110..1240

Blast
BLAST of TCONS_00011271-protein vs. Swiss-Prot (Human)
Match: MDR1 (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3)

HSP 1 Score: 1017.68 bits (2630), Expect = 0.000e+0
Identity = 539/1170 (46.07%), Postives = 762/1170 (65.13%), Query Frame = 0
Query:   96 VSVSQLFRYASTTDWVFMFFASISACINGVLQPVSFIIFGELINDFVD-----------------EDSGKTIDLNKEMEKFGIYYVYIGLGAIVFGYFQNMLWLRASINQAFRIRTLAFESILKQDIGFFDTNDAGELSSRLADGVTKVQNGIGDKIGSLQHAIAMLVGGIIIGFIYGWKLTLVIIAMSPLLFIGAFATGKVIGMITSQEQTSYAKAGSIAEEVLSSIRTVVAFGSERKEIDRYRVNLKDAEKAGIRKGL----STGFAFALFNSTLFGCMALGFWYGGTLIGDGEINAGDLLIVFFSVMIGANQFGQVGPNIEAFSSARGAAYTIFKLIERKPVIDSLTDAGEKT-KIEGDIKFVDCQFSYPSRPDIKILRGLNLNIKPGTTCALVGESGCGKSTTVKLIQRFYDAAGGRVQIDGVDIKRINVKHLRKHIGVVSQEPVLFDASIKKNILMGHPEATEDMVIEAAKNANAHDFISKLPQGYDTNVGEGGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDTGSEAIVQAALDKASLGRTTVIIAHRLSTVKNADSIAVVSAGQVSELGSHKELMDKRGEYFKLVMLQNFEEQEEEELNSELGSVISESEREEIIARKMMRSLSQLSNTGSETDQQLVKELIDREITHRKSIRRVKSTVGTQKQVSKLDRQLSQTKEVKEEELPEDEPVQIPPIS--RILKLNAKEWPYIVTGIFFSAIAGTMPVLFAIILAEILQSFAE-NDPQEMEKKMEFWAIMFMVIGLVIGVAFFIAQYLFAKAGEALTTRLREMAFTSLLRQEIGYFDLPQHSTGALSARLSADASAVQGATSTRLNTLTQVVVTGLSSLIVAFAYSWQLSLLVLAFVPFIAMFGAIQTSLNTSFAGDAQKKLSQAGAISTEAIMQIRTVASLGKEDFFFDKYKSLLMGPTQGSRKGAHIYGIAYGFSIGVMLFSNGACFRLGGYLAERDGLSLSSIVKVIIGIQFGAMTAGQVASFAPDYVKAKTAAGRILALFDRKPAIDSYSTEGI-KNEIKGDITFTDVEFTYPTRQNVPILQKLNIKIPRGRTVAFVGASGCGKSTSVSLLERFYEVAGGEVLIDDIPIKDYNIRALRSQIGIVQQEPVLFDRSIRDNILYGIEDPSQITQEQIEEACRNSNIHHVI 1239
            VSV  +FRY++  D ++M   +++A I+G   P+  ++FGE+ + F +                  D+G  ++L ++M ++  YY  IG G +V  Y Q   W  A+  Q  +IR   F +I++Q+IG+FD +D GEL++RL D V+K+  GIGDKIG    ++A    G I+GF  GWKLTLVI+A+SP+L + A    K++   T +E  +YAKAG++AEEVL++IRTV+AFG ++KE++RY  NL++A++ GI+K +    S G AF L    ++   AL FWYG TL+  GE + G +L VFFSV+IGA   GQ  P+IEAF++ARGAAY IFK+I+ KP IDS + +G K   I+G+++F +  FSYPSR ++KIL+GLNL ++ G T ALVG SGCGKSTTV+L+QR YD   G V +DG DI+ INV+ LR+ IGVVSQEPVLF  +I +NI  G    T D + +A K ANA+DFI KLP  +DT VGE GAQLSGGQKQRIAIARALVR+PKILLLDEATSALDT SEA+VQ ALDKA  GRTT++IAHRLSTV+NAD IA    G + E G+H ELM ++G YFKLV +Q    +       EL +   ES+ E          +  L  + +++   L+     R+ + R+S+R      G+Q Q    DR+LS TKE  +E         IPP+S  RI+KLN  EWPY V G+F + I G +   FAII ++I+  F   +DP+   +    ++++F+ +G++  + FF+  + F KAGE LT RLR M F S+LRQ++ +FD P+++TGAL+ RL+ DA+ V+GA  +RL  +TQ +    + +I++F Y WQL+LL+LA VP IA+ G ++  + +  A   +K+L  +G I+TEAI   RTV SL +E  F   Y   L  P + S + AHI+GI + F+  +M FS   CFR G YL     +S   ++ V   + FGAM  GQV+SFAPDY KAK +A  I+ + ++ P IDSYSTEG+  N ++G++TF +V F YPTR ++P+LQ L++++ +G+T+A VG+SGCGKST V LLERFY+   G+VL+D   IK  N++ LR+ +GIV QEP+LFD SI +NI YG ++   ++QE+I  A + +NIH  I
Sbjct:   34 VSVFSMFRYSNWLDKLYMVVGTLAAIIHGAGLPLMMLVFGEMTDIFANAGNLEDLMSNITNRSDINDTGFFMNLEEDMTRYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGAAFLL----IYASYALAFWYGTTLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPSIDSYSKSGHKPDNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNE------VELENAADESKSE----------IDALEMSSNDSRSSLI-----RKRSTRRSVR------GSQAQ----DRKLS-TKEALDES--------IPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGCFRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYG-DNSRVVSQEEIVRAAKEANIHAFI 1158          

HSP 2 Score: 446.432 bits (1147), Expect = 8.644e-136
Identity = 240/571 (42.03%), Postives = 353/571 (61.82%), Query Frame = 0
Query:  108 TDWVFMFFASISACINGVLQPVSFIIFGELINDFVDEDSGKTIDLNKEMEKFGIYYVYIGLGAIVFGYFQNMLWLRASINQAFRIRTLAFESILKQDIGFFD--TNDAGELSSRLADGVTKVQNGIGDKIGSLQHAIAMLVGGIIIGFIYGWKLTLVIIAMSPLLFIGAFATGKVIGMITSQEQTSYAKAGSIAEEVLSSIRTVVAFGSERKEIDRYRVNLKDAEKAGIRKGLSTGFAFALFNSTLFGCMALGFWYGGTLIGDGEINAGDLLIVFFSVMIGANQFGQVGPNIEAFSSARGAAYTIFKLIERKPVIDSLTDAG-EKTKIEGDIKFVDCQFSYPSRPDIKILRGLNLNIKPGTTCALVGESGCGKSTTVKLIQRFYDAAGGRVQIDGVDIKRINVKHLRKHIGVVSQEPVLFDASIKKNILMGHPE--ATEDMVIEAAKNANAHDFISKLPQGYDTNVGEGGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDTGSEAIVQAALDKASLGRTTVIIAHRLSTVKNADSIAVVSAGQVSELGSHKELMDKRGEYFKLVMLQ 673
            T+W +       A ING LQP   IIF ++I  F   D  +T   N  +  F + ++ +G+ + +  + Q   + +A      R+R + F S+L+QD+ +FD   N  G L++RLA+   +V+  IG ++  +   IA L  GIII FIYGW+LTL+++A+ P++ I      K++     +++     +G IA E + + RTVV+   E+K    Y  +L+   +  +RK    G  F+   + ++   A  F +G  L+    ++  D+L+VF +V+ GA   GQV      ++ A+ +A  I  +IE+ P+IDS +  G     +EG++ F +  F+YP+RPDI +L+GL+L +K G T ALVG SGCGKST V+L++RFYD   G+V +DG +IKR+NV+ LR H+G+VSQEP+LFD SI +NI  G      +++ ++ AAK AN H FI  LP  Y T VG+ G QLSGGQKQRIAIARALVR P ILLLDEATSALDT SE +VQ ALDKA  GRT ++IAHRLST++NAD I V   G+V E G+H++L+ ++G YF +V +Q
Sbjct:  706 TEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNL--FSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGCFRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274          
The following BLAST results are available for this feature:
BLAST of TCONS_00011271-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MDR18.644e-13646.07Multidrug resistance protein 1 OS=Homo sapiens GN=... [more]
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