|
Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011271-protein ID=TCONS_00011271-protein|Name=TCONS_00011271-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1240bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00011271-protein vs. Swiss-Prot (Human)
Match: MDR1 (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3) HSP 1 Score: 1017.68 bits (2630), Expect = 0.000e+0 Identity = 539/1170 (46.07%), Postives = 762/1170 (65.13%), Query Frame = 0
Query: 96 VSVSQLFRYASTTDWVFMFFASISACINGVLQPVSFIIFGELINDFVD-----------------EDSGKTIDLNKEMEKFGIYYVYIGLGAIVFGYFQNMLWLRASINQAFRIRTLAFESILKQDIGFFDTNDAGELSSRLADGVTKVQNGIGDKIGSLQHAIAMLVGGIIIGFIYGWKLTLVIIAMSPLLFIGAFATGKVIGMITSQEQTSYAKAGSIAEEVLSSIRTVVAFGSERKEIDRYRVNLKDAEKAGIRKGL----STGFAFALFNSTLFGCMALGFWYGGTLIGDGEINAGDLLIVFFSVMIGANQFGQVGPNIEAFSSARGAAYTIFKLIERKPVIDSLTDAGEKT-KIEGDIKFVDCQFSYPSRPDIKILRGLNLNIKPGTTCALVGESGCGKSTTVKLIQRFYDAAGGRVQIDGVDIKRINVKHLRKHIGVVSQEPVLFDASIKKNILMGHPEATEDMVIEAAKNANAHDFISKLPQGYDTNVGEGGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDTGSEAIVQAALDKASLGRTTVIIAHRLSTVKNADSIAVVSAGQVSELGSHKELMDKRGEYFKLVMLQNFEEQEEEELNSELGSVISESEREEIIARKMMRSLSQLSNTGSETDQQLVKELIDREITHRKSIRRVKSTVGTQKQVSKLDRQLSQTKEVKEEELPEDEPVQIPPIS--RILKLNAKEWPYIVTGIFFSAIAGTMPVLFAIILAEILQSFAE-NDPQEMEKKMEFWAIMFMVIGLVIGVAFFIAQYLFAKAGEALTTRLREMAFTSLLRQEIGYFDLPQHSTGALSARLSADASAVQGATSTRLNTLTQVVVTGLSSLIVAFAYSWQLSLLVLAFVPFIAMFGAIQTSLNTSFAGDAQKKLSQAGAISTEAIMQIRTVASLGKEDFFFDKYKSLLMGPTQGSRKGAHIYGIAYGFSIGVMLFSNGACFRLGGYLAERDGLSLSSIVKVIIGIQFGAMTAGQVASFAPDYVKAKTAAGRILALFDRKPAIDSYSTEGI-KNEIKGDITFTDVEFTYPTRQNVPILQKLNIKIPRGRTVAFVGASGCGKSTSVSLLERFYEVAGGEVLIDDIPIKDYNIRALRSQIGIVQQEPVLFDRSIRDNILYGIEDPSQITQEQIEEACRNSNIHHVI 1239
VSV +FRY++ D ++M +++A I+G P+ ++FGE+ + F + D+G ++L ++M ++ YY IG G +V Y Q W A+ Q +IR F +I++Q+IG+FD +D GEL++RL D V+K+ GIGDKIG ++A G I+GF GWKLTLVI+A+SP+L + A K++ T +E +YAKAG++AEEVL++IRTV+AFG ++KE++RY NL++A++ GI+K + S G AF L ++ AL FWYG TL+ GE + G +L VFFSV+IGA GQ P+IEAF++ARGAAY IFK+I+ KP IDS + +G K I+G+++F + FSYPSR ++KIL+GLNL ++ G T ALVG SGCGKSTTV+L+QR YD G V +DG DI+ INV+ LR+ IGVVSQEPVLF +I +NI G T D + +A K ANA+DFI KLP +DT VGE GAQLSGGQKQRIAIARALVR+PKILLLDEATSALDT SEA+VQ ALDKA GRTT++IAHRLSTV+NAD IA G + E G+H ELM ++G YFKLV +Q + EL + ES+ E + L + +++ L+ R+ + R+S+R G+Q Q DR+LS TKE +E IPP+S RI+KLN EWPY V G+F + I G + FAII ++I+ F +DP+ + ++++F+ +G++ + FF+ + F KAGE LT RLR M F S+LRQ++ +FD P+++TGAL+ RL+ DA+ V+GA +RL +TQ + + +I++F Y WQL+LL+LA VP IA+ G ++ + + A +K+L +G I+TEAI RTV SL +E F Y L P + S + AHI+GI + F+ +M FS CFR G YL +S ++ V + FGAM GQV+SFAPDY KAK +A I+ + ++ P IDSYSTEG+ N ++G++TF +V F YPTR ++P+LQ L++++ +G+T+A VG+SGCGKST V LLERFY+ G+VL+D IK N++ LR+ +GIV QEP+LFD SI +NI YG ++ ++QE+I A + +NIH I
Sbjct: 34 VSVFSMFRYSNWLDKLYMVVGTLAAIIHGAGLPLMMLVFGEMTDIFANAGNLEDLMSNITNRSDINDTGFFMNLEEDMTRYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGAAFLL----IYASYALAFWYGTTLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPSIDSYSKSGHKPDNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNE------VELENAADESKSE----------IDALEMSSNDSRSSLI-----RKRSTRRSVR------GSQAQ----DRKLS-TKEALDES--------IPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGCFRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYG-DNSRVVSQEEIVRAAKEANIHAFI 1158 HSP 2 Score: 446.432 bits (1147), Expect = 8.644e-136 Identity = 240/571 (42.03%), Postives = 353/571 (61.82%), Query Frame = 0
Query: 108 TDWVFMFFASISACINGVLQPVSFIIFGELINDFVDEDSGKTIDLNKEMEKFGIYYVYIGLGAIVFGYFQNMLWLRASINQAFRIRTLAFESILKQDIGFFD--TNDAGELSSRLADGVTKVQNGIGDKIGSLQHAIAMLVGGIIIGFIYGWKLTLVIIAMSPLLFIGAFATGKVIGMITSQEQTSYAKAGSIAEEVLSSIRTVVAFGSERKEIDRYRVNLKDAEKAGIRKGLSTGFAFALFNSTLFGCMALGFWYGGTLIGDGEINAGDLLIVFFSVMIGANQFGQVGPNIEAFSSARGAAYTIFKLIERKPVIDSLTDAG-EKTKIEGDIKFVDCQFSYPSRPDIKILRGLNLNIKPGTTCALVGESGCGKSTTVKLIQRFYDAAGGRVQIDGVDIKRINVKHLRKHIGVVSQEPVLFDASIKKNILMGHPE--ATEDMVIEAAKNANAHDFISKLPQGYDTNVGEGGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDTGSEAIVQAALDKASLGRTTVIIAHRLSTVKNADSIAVVSAGQVSELGSHKELMDKRGEYFKLVMLQ 673
T+W + A ING LQP IIF ++I F D +T N + F + ++ +G+ + + + Q + +A R+R + F S+L+QD+ +FD N G L++RLA+ +V+ IG ++ + IA L GIII FIYGW+LTL+++A+ P++ I K++ +++ +G IA E + + RTVV+ E+K Y +L+ + +RK G F+ + ++ A F +G L+ ++ D+L+VF +V+ GA GQV ++ A+ +A I +IE+ P+IDS + G +EG++ F + F+YP+RPDI +L+GL+L +K G T ALVG SGCGKST V+L++RFYD G+V +DG +IKR+NV+ LR H+G+VSQEP+LFD SI +NI G +++ ++ AAK AN H FI LP Y T VG+ G QLSGGQKQRIAIARALVR P ILLLDEATSALDT SE +VQ ALDKA GRT ++IAHRLST++NAD I V G+V E G+H++L+ ++G YF +V +Q
Sbjct: 706 TEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNL--FSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGCFRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274 The following BLAST results are available for this feature:
BLAST of TCONS_00011271-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|
