TCONS_00011172-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011172-protein
Unique NameTCONS_00011172-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1120

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011172-protein ID=TCONS_00011172-protein|Name=TCONS_00011172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1120bp
MVTSCTQPTRRMERGQCMTLVDHDKIKAFVYEFAVRGLLPHIEKLMRNLS
EQILNRRGLHKSLFNVTKKWFGGNKTQGGTIGSSSSSANYQRDSVELQHR
RLGDLSFLVQHYDLAYNSYHSAKREFNNDHAWLYFAGSLEMAAISAFLTP
NNKNYPVHYFEACISTYLNTCRLPEYAARACLLSTETFKSRNRNLDAANE
FIKLTNEDPDLRSALLLEQAAHCYLNNKPPMVRKYAFHMILAGHRYSKSA
QRKHTLRCYINALQIYEDKGWHLAEDHVNFVIGRQSFNLGNLDDAHIALK
CLLLYESQQPPSQQASHLREFLAVFKQYLETKKNNSKKFQLPELPLPNIK
AQLTRCLTCYKGPITPPTPATNSPSINKRTRTVHAGNYTFQKNYSKEYTE
RWSQMEQKIVQHVTGGLPYPFKPFTPCLSSSTENKNPATVACKESFAFEI
VFRNPLKIPLNLLNLTLLWQFTPDKTNDEEPEPFDNKENDCPETIEAETI
QNFFLKPLEEKPACLRVCIKQPGQIQILGVKYTLSSVGVTSSLEETSKQE
LDEHQQAALNTVGVYGIQMSIQGARLNNTKQQKAMKTYDIDKRLELQIVP
SLPFLDVTMSNLPVTLLCGETQTSQFTFKNAGQTPMKNLHLICSCPQSFA
FGSRKSGGDNNKQPSKYPVAEKGDSAQPSKTNIANLNNTFNGVLKIPVAN
DALQPGEEVTLDVAVYGALSPGVHEIYFLFYYEPLETVKKVPYRLLQQMI
RIQTLSTLSITTSMQKSFGKETKGSSDTSTTQDHLFTMNIENRAQGSSTL
RCVEFSLKQITCYSKLWNPKTLVKLPKESFFLRPGETCSLHLKASTCQLD
KESFFLRPGETCSLHLKASTCQLDKDIDQILVSRIQLDDQDVEMSDQAMD
LFLQSSYNKDAIDNSFAMILHWETFYIDESFSRNVIRGQSYVVCTQPISH
WIKQQLLINNTEKKLVAKQDTSTIPQVSNSLILSPVDGINLSYHYNALYK
HDFSQSSLCKIPVTITCCNMTSQDVKIELEAMDANEQSSDSGITTEPNSL
CQILWSGRRKQTLTVPPNSSMSVILDLMTSIGLFEIQHLNAWLIKTNENG
EVEKLKLTLPSSHYVCVEVI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006261XLOC_006261Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011172TCONS_00011172Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR024420TRAPP_III_complex_Trs85
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 58..412
e-value: 8.5E-4
score: 18.1
IPR024420TRAPP III complex, Trs85PFAMPF12739TRAPPC-Trs85coord: 12..279
e-value: 5.0E-103
score: 345.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 598..740
e-value: 3.5E-4
score: 20.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..678

Blast
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BLAST of TCONS_00011172-protein vs. Swiss-Prot (Human)
Match: TPPC8 (Trafficking protein particle complex subunit 8 OS=Homo sapiens GN=TRAPPC8 PE=1 SV=2)

HSP 1 Score: 548.51 bits (1412), Expect = 1.410e-173
Identity = 357/1049 (34.03%), Postives = 551/1049 (52.53%), Query Frame = 0 
Query:   15 GQCMTLVDHDKIKAFVYEFAVRGLLPHIEKLMRNLSEQILNRRGLHKSLFNVTKKWFGGNKTQGGTIGS--SSSSANYQRDSVELQHRRLGDLSFLVQHYDLAYNSYHSAKREFNNDHAWLYFAGSLEMAAISAFLTPNN-KNYPVHYFEACISTYLNTCRLPEYAARACLLSTETFKSRNRNLDAANEFIKLTNEDPDLRSALLLEQAAHCYLNNKPPMVRKYAFHMILAGHRYSKSAQRKHTLRCYINALQIYEDKGWHLAEDHVNFVIGRQSFNLGNLDDAHIALKCLLLYESQQPPSQQASHLREFLAVFKQYLETKKNNSKKFQLPELPLPNIKAQLTRCLTCYKGPITPPTPATNSPSINKRTRTVHAGNYTFQKNYSKEYTERWSQMEQKIVQHVTGG-LPYPFKPFTPCLSSSTENKNPATVACKESFAFEIVFRNPLKIPLNLLNLTLLWQFTPDKTNDEEPEPFDNKENDCPETIEAETIQNFFLKPLEEKPACLRVCIKQPGQIQILGVKYTLSSVGVTSSLEETSKQELDEHQQAALNTVGVYGIQ-MSIQGARLNNTKQQKAMKTYDIDKRLELQIVPSLPFLDVTMSNLPVTLLCGETQTSQFTFKNAGQTPMKNLHLICSCPQSFAFGSRKS-------GGDNNKQPSKYPVAEKGDS-----AQPSKTNIANLNNTFNGVLKIPVANDALQPGEEVTLDVAVYGALSPGVHEIYFLFYYEPLETVKKVPYRLLQQMIRIQTLSTLSITTSMQKSFGKETKGSSDTSTTQDHLFTMNIENRAQGSSTLRCVEFSLKQITCYSKLWNPKTLVKLPK-ESFFLRPGETCSLHLKASTCQLDKESFFLRPGETCSLHLKASTCQLDKDIDQILVSRIQLDD-------QDVEMSDQAMDLFLQSSYNKDAI-------DNSFAMILHWETFYIDESFSRNVIRGQSYVVC----TQPISHWIKQQLLINNTEKKLVAKQDTSTIPQVSNSLILSPVDGINLSYHYNALYKHDFSQSSLCKIPVTITCCNMTSQDVKI 1027
            G C+TL DHD+I+ F+ EF  RGLLPHIEK +R L++Q+++R+GL +SLF+ TKKWF G+K    +I    ++S   Y  ++ ELQ R++ DL FLVQHYDLAY+ YH+AK++F ND A LY AG+LEMAA+SAFL P   + YP HY +  I TY + C+    A R  LLS E  KS+++  +AA   I+LT+ED DLRSALLLEQAAHC++N K PMVRKYAFHMILAGHR+SK+ Q+KH LRCY  A+Q+Y+ KGW LAEDH+NF IGRQS+ L  LD+A  A + +L+ ES+Q  +QQ + LRE+L V+K   +   +      LP+LPLP I +  TR    +             P+  ++    H    +  + Y  E +++W ++E+++V  V  G +P  F P   CL+S ++N        +E    E+ FRNPLK+ L L +L+LLW+F P   + ++ E         PE I AE I  F +   E K A L++     G++ ILGV Y L ++  + +++           + +L ++ V G Q + IQG RLNNTK++K    Y  D+RL+  I   +P L+V   + P  LLCGE + +   F N  + P+  L ++   P+ F FG   +           N    K  V +         +  S  +      +   V+ +P+ +  L PG  V L + + G    GVHEI FLFYYE ++   K+ +R+L+    I T  +L++  ++ +S   E    ++     + L  +++EN     + ++  EF + Q++  SK W  +  V L + +   L   E      KA  C  +KE    +  E      K +   +    +QI+ S     D        +++     + +  +    +DA+       +    +++ W+ + +++S  + ++ GQ +V+      +  S+  KQ+      E +L+       I   S   +      I  S HY   + H F Q SLC +PVT+   N +  DV +
Sbjct:  337 GACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINDLKNTSGLLYPPEAPELQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDICKNMVLAERCVLLSAELLKSQSKYSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAAQQGAFLREYLYVYKNVSQLSPDGP----LPQLPLPYINSSATRVFFGHD----------RRPADGEKQAATHV---SLDQEYDSESSQQWRELEEQVVSVVNKGVIPSNFHPTQYCLNSYSDNSRFPLAVVEEPITVEVAFRNPLKVLLLLTDLSLLWKFHPKDFSGKDNEEVKQLVTSEPEMIGAEVISEFLINGEESKVARLKLFPHHIGELHILGVVYNLGTIQGSMTVDGIGALPGCHTGKYSL-SMSVRGKQDLEIQGPRLNNTKEEKTSVKYGPDRRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDATSVCTALISSASSVDFGIGTGSQPEVIPVPLPDTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKIRHRILRHTAIICTSRSLNVRATVCRSNSLE----NEEGRGGNMLVFVDVENTNTSEAGVK--EFHIVQVSSSSKHWKLQKSVNLSENKDTKLASREKGKFCFKAIRC--EKEEAATQSSE------KYTFADIIFGNEQIISSASPCADFFYRSLSSELKKPQAHLPVHTEKQSTEDAVRLIQKCSEVDLNIVILWKAYVVEDS-KQLILEGQHHVILRTIGKEAFSYPQKQE----PPEMELLKFFRPENITVSSRPSVEQLSSLIKTSLHYPESFNHPFHQKSLCLVPVTLLLSNCSKADVDV 1348
The following BLAST results are available for this feature:
BLAST of TCONS_00011172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPPC81.410e-17334.03Trafficking protein particle complex subunit 8 OS=... [more]
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