TCONS_00010831-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010831-protein
Unique NameTCONS_00010831-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length324

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010831-protein ID=TCONS_00010831-protein|Name=TCONS_00010831-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
MISLQAAKKRNMDLKLILAFLPVIQCMVVANNTNDITKLKSDLKLLEAKY
SRLEDGMKFSSPYCEKYVKGACGSCICKDDFNLPKKYYCDCRNQSPQRDC
LAHRQNGMKIDGIYEITMNSYLNTVAFCDQTTLGGGWTVIQRRMDGSTNF
FRSWNEYKVGFGQLHREFWFGNDKIHYLTAQAILPKGSEALIQVKFLGNG
FNPNTIYNNRYSHFHIDNEKHAYELHVTGPSGGHYPEYFTKYQNNQKFST
WDRDNDQSSSYNCAYSYQKAGWWINGDTNSCTTGREFNSINNPYDAANTQ
TWYHRISWYNLKVSFTAMKVRRLQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006073XLOC_006073Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010831TCONS_00010831Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..56
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 95..323
e-value: 1.2E-42
score: 157.6
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 97..320
e-value: 3.1E-43
score: 148.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 91..324
score: 39.41
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 91..321
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 27..247
e-value: 2.9E-48
score: 163.9
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 248..320
e-value: 5.3E-11
score: 42.0

Blast
[Close]
BLAST of TCONS_00010831-protein vs. Swiss-Prot (Human)
Match: TENR (Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 2.213e-32
Identity = 82/239 (34.31%), Postives = 118/239 (49.37%), Query Frame = 0 
Query:   96 PQRDCLAHRQNGMKIDGIYEITMNSYLNT--VAFCDQTTLGGGWTVIQRRMDGSTNFFRSWNEYKVGFGQLHREFWFGNDKIHYLTAQAI------LPKGSEALIQVKFLGNGFNPNTIYNNRYSHFHIDNEKHAYELHVTGPSGGHYPEYFTKYQNNQKFSTWDRDNDQSSSYNCAYSYQKAGWWINGDTNSCTTGREFNSINNPY-DAANTQ--TWYHRISW--YNLKVSFTAMKVR 321
            PQ DC  H  NG  + G+Y I +N  L+     +CD TT GGGW V QRR +G T+FFR W +Y+VGFG +  EFW G D IH +T+Q        +  G EA                    Y  F +++ ++ Y+L + G   G   +  + Y   + FST DRDND + + NCA SY+ A W+ N     C       ++N  Y ++ ++Q   WYH   W  +   + F  MK+R
Sbjct: 1135 PQ-DCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFA----------------SYDRFSVEDSRNLYKLRI-GSYNGTAGDSLS-YHQGRPFSTEDRDNDVAVT-NCAMSYKGAWWYKN-----CHR----TNLNGKYGESRHSQGINWYH---WKGHEFSIPFVEMKMR 1341
The following BLAST results are available for this feature:
BLAST of TCONS_00010831-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENR2.213e-3234.31Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3[more]
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