TCONS_00010630-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00010630-protein
Unique Name	TCONS_00010630-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1022

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00010630-protein ID=TCONS_00010630-protein|Name=TCONS_00010630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1022bp
MAENVKVAVRVRPFNSREKERNAKLIIKMQGDSTYITDPANMGAEPRKFA
FDYSYWSHDGYKEEEDGYLSPTNPSYADQKVVFQDLGEGVLANAWKGYNC
SLFAYGQTGSGKSYSMVGYGVNKGVIPITCDRLFQDIDAKKKEGSKTEYQ
VSLSMLEIYNEQVRDLLNPSTLKIKGGMKVRQNPKTGFYVDGLLLLPVGS
YKDINAKIEQGTKNRTVASTNMNATSSRAHTIVALTFTQKGKNENTGQNT
TKTSIVNLVDLAGSERADSTGATGDRLKEGSAINKSLSTLGNVIKALADA
SSGKKTLVPFRDSVLTKLLKNALGGNSKTIMIAALSPADINYDETLSTLR
FADRAKAIKTKAVVNESPTDKLIRELREENAKLLERLKQAQGDPAKLAAI
AAEQNGEPVDDKPSEAEDTSNKIDEAEVERMKQEMEDRLKRNQEEMEQMK
KSWEDRLKEEHNASKAKEEELQKEHEMKKMTAHFWNLNEDPQLTNMVNHF
LQPGEYRIGNRKADPAPEILLNGLSILKDHAKVIHDGSTDCIRITPSSGA
KCLINGVARVDECELHHGDRVMFGNNHLFVLHHPKDKDLLAKKDAAKKEG
KTFVDPEQNFEKAQEEIAQNSGLLNYGDITDKKDSGKSKEDMILQEDLLK
ILPMINEANAMSEELDKKVAFEPVLISPQARGEKEGKTEVNVKMKDLTND
NEWLWDKNKFINRKFIMQEIYQNFVDGDPDWDVEKEKDPFWEPTDTDVLI
GKVHVYLQSLAYKIELDENIAITDYKGNEQGQLTVKLEPCTSSGECLDDD
DFVEEPKELIGGALHFKVSIKGALGLPKKFSKGESFCKYKVYIDESENET
KRISNTINPNFNHEKIFSFNPVTQLFVDYLMKSSLVIDVRGKQSDDAGKK
ASVSTKQLMNVEQLNRGRTQTMVKGDEDERYKMLCEINTQKRRAERNAKK
LQRINDLVDQLKKENKPSLSVNDLESLLQGPDKKDMQRFHAAAGVVLQGE
KLNKDAVANKGKIQSSTACSIQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005957	XLOC_005957	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00010630	TCONS_00010630	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR022140	Kinesin-like_KIF1-typ
IPR000008	C2_dom
IPR008984	SMAD_FHA_domain
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 373..393
None	No IPR available	COILS	Coil	Coil	coord: 941..964
None	No IPR available	COILS	Coil	Coil	coord: 416..474
None	No IPR available	GENE3D	2.60.200.20		coord: 472..589 e-value: 2.1E-21 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..425
None	No IPR available	CDD	cd00060	FHA	coord: 499..581 e-value: 1.54409E-8 score: 52.3886
None	No IPR available	CDD	cd01365	KISc_KIF1A_KIF1B	coord: 3..365 e-value: 0.0 score: 538.477
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 255..273 score: 58.46 coord: 308..329 score: 58.52 coord: 220..237 score: 45.83 coord: 97..118 score: 65.91
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 2..366 e-value: 8.1E-160 score: 546.9
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 1..370 e-value: 3.2E-130 score: 433.3
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 10..358 e-value: 7.5E-102 score: 340.6
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 4..358 score: 107.406
IPR022140	Kinesin-like KIF1-type	PFAM	PF12423	KIF1B	coord: 711..751 e-value: 8.0E-7 score: 29.4
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 814..956 e-value: 1.8E-7 score: 30.6 coord: 680..790 e-value: 0.26 score: 10.7
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 834..908
IPR008984	SMAD/FHA domain	SUPERFAMILY	49879	SMAD/FHA domain	coord: 482..582
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..368

Blast

[Close]

BLAST of TCONS_00010630-protein vs. Swiss-Prot (Human)
Match: KIF1C (Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3)

HSP 1 Score: 445.277 bits (1144), Expect = 6.403e-139
Identity = 268/666 (40.24%), Postives = 387/666 (58.11%), Query Frame = 0

Query:    4 NVKVAVRVRPFNSREKERNAKLIIKMQGDSTYITDPANMGAEPRKFAFDYSYWSHDGYKEEEDGYLSPTNPSYADQKVVFQDLGEGVLANAWKGYNCSLFAYGQTGSGKSYSMVGY--GVNKGVIPITCDRLFQDIDAKKKEGSKTEYQVSLSMLEIYNEQVRDLLNPSTLKIKGGMKVRQNPKTGFYVDGLLLLPVGSYKDINAKIEQGTKNRTVASTNMNATSSRAHTIVALTFTQKGKNENTGQNTTKTSIVNLVDLAGSERADSTGATGDRLKEGSAINKSLSTLGNVIKALADASSGKKT--LVPFRDSVLTKLLKNALGGNSKTIMIAALSPADINYDETLSTLRFADRAKAIKTKAVVNESPTDKLIRELREENAKLLERLKQAQGDPAK-LAAIAAEQ-------------------------NGEPVDDKPSEAEDTSNKIDEAEVERMKQEMEDRLKRNQEEMEQMKKSWEDRLKEEHNASKAKEEELQKEHEM-------------KKMTAHFWNLNEDPQLTNMVNHFLQPGEYRIGNRKADPAPEILLNGLSILKDHAKVIHDGSTD---CIRITPSSGAKCLINGVARVDECELHHGDRVMFGNNHLFVLHHPKDKDLLAKKDAAKKEGKTFVDPEQNFEKAQEEIAQNSGL 623
            +VKVAVRVRPFN+RE  ++AK ++ MQG++T I +P      P+ F FDYSYWSH           S  +P +A Q+ V++D+GE +L +A++GYN  +FAYGQTG+GKSY+M+G      +G++P  C+ LF  +   + + ++  Y V +S +EIY E+VRDLLNP   K +G ++VR++P  G YV  L  L V SY DI   ++ G K RTVA+TNMN TSSR+H +  + FTQ+  ++ TG ++ K S ++LVDLAGSERADS+GA G RLKEG+ INKSL+TLG VI ALAD  S K+    +P+RDSVLT LLK  LGGNS+T MIAALSPADINY+ETLSTLR+ADR K I+  A++NE P  +LIREL+EE A+L E L  AQG  A  L  +  E+                         NGE    +PS + +T ++I         +E  +RL+  ++ + ++ ++WE++L++   A + + E L  E  +              K T H  NLNEDP ++  + + ++ G  R+G    D    I L G  I + H         D    + + P  GA+  +NG    +   L  G+R++ G NH+F  +HP+   L  ++      G      + NF  AQ+E+ +  G+
Sbjct:    5 SVKVAVRVRPFNARETSQDAKCVVSMQGNTTSIINPKQSKDAPKSFTFDYSYWSHT----------STEDPQFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGRQEPGQQGIVPQLCEDLFSRVS--ENQSAQLSYSVEVSYMEIYCERVRDLLNP---KSRGSLRVREHPILGPYVQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRCHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAIINEDPNARLIRELQEEVARLRE-LLMAQGLSASALEGLKTEEGSVRGALPAVSSPPAPVSPSSPTTHNGE---LEPSFSPNTESQIG-------PEEAMERLQETEKIIAELNETWEEKLRKT-EALRMEREALLAEMGVAVREDGGTVGVFSPKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDMD----IKLTGQFIREQHCLFRSIPQPDGEVVVTLEPCEGAETYVNGKLVTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERERGVPPPPGPPSEPVDWNF--AQKELLEQQGI 637

The following BLAST results are available for this feature:

BLAST of TCONS_00010630-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00010630-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF1C	6.403e-139	40.24	Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1...	[more]

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TCONS_00010630-protein (polypeptide) - C. hemisphaerica