TCONS_00010562-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010562-protein
Unique NameTCONS_00010562-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010562-protein ID=TCONS_00010562-protein|Name=TCONS_00010562-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MLRFILVLATIISAIYAQKCGVSKVPQSRVVNGVEAPQGAWPWIVSLQTR
NGFHYCGGTILSPTWILTASHCVDNNPTAIAVVAGAHNIKAMEWSQQKQW
AKRYIQNPNYKRSDLYADIALIELWKPLIFNDRVSRACIPGFNQYPPAGI
WCYIAGWGRIQHDPRIAPDKLQQARLPILKQHDKYEHILAGFGVQGKANA
CQGDSGGPLMCKTTSGQWMVQGAASWVLKGCHTVSAYTPLTX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005917XLOC_005917Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010562TCONS_00010562Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 198..210
score: 63.28
coord: 114..128
score: 35.57
coord: 57..72
score: 50.29
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 29..241
e-value: 3.8E-54
score: 195.9
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 30..238
e-value: 7.2E-50
score: 169.7
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 30..242
score: 27.647
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 30..231
e-value: 4.07417E-68
score: 210.981
NoneNo IPR availableGENE3D2.40.10.10coord: 132..239
e-value: 3.3E-24
score: 85.0
NoneNo IPR availableGENE3D2.40.10.10coord: 62..131
e-value: 2.7E-24
score: 84.6
NoneNo IPR availableGENE3D2.40.10.10coord: 30..61
e-value: 4.2E-19
score: 67.9
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 67..72
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 199..210
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 6..238

Blast
[Close]
BLAST of TCONS_00010562-protein vs. Swiss-Prot (Human)
Match: CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.328e-45
Identity = 80/215 (37.21%), Postives = 120/215 (55.81%), Query Frame = 0 
Query:   28 SRVVNGVEAPQGAWPWIVSLQTRNGFHYCGGTILSPTWILTASHCVDNNPTAIAVVAGAHNIKAMEWSQQKQWAKRYIQNPNYKRSDLYADIALIELWKPLIFNDRVSRACIPGFNQYPPAGIWCYIAGWGRIQHDPRIAPDKLQQARLPILKQHD-------KYEHILAGFGVQGKANACQGDSGGPLMCKTTSGQWMVQGAASWVLKGCHTVS 235
            SR+VNG +A  G+WPW VSLQ + GFH+CGG+++S  W++TA+HC     T+  VVAG  +  + E + Q     +  +NP +    +  DI L++L  P  F+  VS  C+P  +   PAG  C   GWG+ +++    PDKLQQA LP+L   +       +   ++   G  G  ++C GDSGGPL+C+   G W + G  SW  + C T +
Sbjct:   32 SRIVNGEDAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC--GVRTSDVVVAGEFDQGSDEENIQVLKIAKVFKNPKFSILTVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMICAGASG-VSSCMGDSGGPLVCQ-KDGAWTLVGIVSWGSRTCSTTT 242
The following BLAST results are available for this feature:
BLAST of TCONS_00010562-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB23.328e-4537.21Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
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