TCONS_00010506-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010506-protein
Unique NameTCONS_00010506-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length357

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010506-protein ID=TCONS_00010506-protein|Name=TCONS_00010506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MKLLVLATFCVAFAFATDVEEHLEKFGFMNKFQFDGSSIKHALEKYQKAF
NLPVSGVADEATMKLMATPRCGRPDNDANNLFADTAWRKKALSYYYNNYT
PDLSRSDVRSLTEKAFKFWADVAPLHFTEKSGGDIVVSFGSRGHHDGKRQ
CGFPFDGRGGVLAHAFFPPDGRLHFDEDEGYTARSSSGTNYLWVATHELG
HILGLEHDTNNRNAVMYPYYQPYRANMQLHSNDIARIQRLYGRGQGSVNG
NGGSGGSGGSGGSGGSGGSGDCKDLQASSFCSSKRDGCSKWGNDWKRYME
KNCKKTCGFCSGGGSGGSGDCKDTVTDCQKNIRGCSSWGQAWIDYMKKNC
KKSCNFC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005894XLOC_005894Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010506TCONS_00010506Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021190Pept_M10A
IPR006026Peptidase_Metallo
IPR003582ShKT_dom
IPR001818Pept_M10_metallopeptidase
IPR002477Peptidoglycan-bd-like
IPR024079MetalloPept_cat_dom
IPR033739M10A_MMP
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 138..166
score: 37.59
coord: 194..219
score: 45.36
coord: 112..127
score: 47.79
coord: 66..79
score: 48.08
coord: 229..242
score: 51.66
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 83..243
e-value: 8.9E-43
score: 158.1
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 271..311
e-value: 0.2
score: 20.8
coord: 320..357
e-value: 2.5
score: 16.9
IPR003582ShKT domainPFAMPF01549ShKcoord: 281..310
e-value: 0.0011
score: 19.3
coord: 321..357
e-value: 9.4E-5
score: 22.8
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 321..357
score: 9.518
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 272..310
score: 8.705
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 86..242
e-value: 3.1E-44
score: 150.5
IPR002477Peptidoglycan binding-likePFAMPF01471PG_binding_1coord: 18..66
e-value: 1.6E-8
score: 34.5
IPR002477Peptidoglycan binding-likeSUPERFAMILY47090PGBD-likecoord: 18..75
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 15..250
e-value: 9.8E-65
score: 217.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..270
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 47..241
IPR033739Peptidase M10A, catalytic domainCDDcd04278ZnMc_MMPcoord: 87..242
e-value: 4.59072E-67
score: 209.753

Blast
[Close]
BLAST of TCONS_00010506-protein vs. Swiss-Prot (Human)
Match: MMP7 (Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.765e-46
Identity = 93/237 (39.24%), Postives = 133/237 (56.12%), Query Frame = 0 
Query:   20 EEHLEKFGFMNKFQFDGSSIKHALEKYQKAFNLPVSGVADEATMKLMATPRCGRPDNDANNLFADTA-WRKKALSYYYNNYTPDLSRSDVRSLTEKAFKFWADVAPLHFTEKSGG--DIVVSFGSRGHHDGKRQCGFPFDGRGGVLAHAFFPPDGR---LHFDEDEGYTARSSSGTNYLWVATHELGHILGLEHDTNNRNAVMYPYY---QPYRANMQLHSNDIARIQRLYGRGQGS 247
            +++L++F   +    + +S++  L++ QK F LP++G+ +   +++M  PRCG PD    +LF ++  W  K ++Y   +YT DL    V  L  KA   W    PLHF +   G  DI++ F    H D      +PFDG G  LAHAF P  G     HFDEDE +T  SS G N+L+ ATHELGH LG+ H +++ NAVMYP Y    P   N +L  +DI  IQ+LYG+   S
Sbjct:   36 QDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDS-----YPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGH-SSDPNAVMYPTYGNGDP--QNFKLSQDDIKGIQKLYGKRSNS 264
The following BLAST results are available for this feature:
BLAST of TCONS_00010506-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMP76.765e-4639.24Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1[more]
back to top