TCONS_00010419-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010419-protein
Unique NameTCONS_00010419-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3419

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010419-protein ID=TCONS_00010419-protein|Name=TCONS_00010419-protein|organism=Clytia hemisphaerica|type=polypeptide|length=3419bp
MMPKYHFTMKSYIYVNEMMSDSEIQLLWIKRMKRYLGETEYNLQLIDMKR
TTILYPQITIKWYNCSIQDPCSQDALHLKSLLLNDKNHHSLNEQFSRSMV
PEFVLISGAMEQQQPCQVITTTTGTPALTTTPPVNQIPITVMKVLKVEID
VCEQVLYQIPANAFFDVEDGYTRNLKLSLTNKDDSKVDELCINFDKGAQT
IYFRYVKDLFQNNLELKLTAMDSEGGSATSDLVITTKANVAELSHWFSMR
SYVYNIVPQKLNILNSFTAKLEHFFSDKSGGQIMFKKLSYTDNYMEVEWS
NCSLYTTCKNSSLSKMKSKMLMFDSSSIVNPQFISFMAPSFVITFLQMQY
GDICYPHPSTTVVPTPSTQVTPQPSVTPTHGLNTPPRVMKEIPVYSVPLC
ALFSFRIPQDTFYDREDGGTRNLRLELRQFNDQELASTSWIQFVESTQVV
YGQFRQEGNNMDSKYISYILRAYDRSGLNTFTVITMKTPPMDTVPYFIEA
EFTRFYDENTPELISQLFLTSKISTYLGEQNVGNVLAISYKRTPNTIELS
WTNCRLIDRSCQNNEVQDNISKFATNGVDQINDDFRRAMDPYYIVKKVLV
NTSNCDKLPRTTTIPSPSSSMYPAMSSISTNQPPRVNGIIEPIPLKKCGS
FSYTIPNNLFIDEDGNTRNLRIQFFDIYGNEVNNRTSWVQYNPKLFLIYG
LIKCSDIEKQPDAGYQYILEASDSQGLSVFTILPFQKLDQITRIGFEIEM
EIECSFDAVTPYLNDIFQIINKIVFFFGDHNMDNIKVVKFFEKPGSIGTI
IFKWTNCTFDFTTCPTDQIELLVQKITSSNGAFAKSFEPNYRVKSIEYVY
NTPCQKPTTTLAPTTTPLPSPPKVVNYISTIITKRCANLHFPIPEKTFYD
DEDGWTRNLTLLLMTVTDEKLSSGSWIQFDQQSQTIIGRPAKLTNIPDPY
QSFIYNLVAMDKEGNQSPLVIRIDVLSDPKPNTINQNFTLILKKNFPINI
PDVKAYKERLKTKIASYYGDTGSYFINEIDFASNQNSLQLSWSNCTVNGP
SCNNTLARLIKDKIMDPSGKCRTQFAFIFLPEFTVKELTMQINSDCGIIT
STITPTTSALVTPSSSISPMPDTTIKVLVEEINIPVDYCKQVEYMIPENI
FHDEATGNSRSFTYSLLYEDKLTVTCSSWLQLNVTSGNELYGNLLRTQPV
NPVKYKLRALNEVGASATSDILIDTTQLEKLNISYRAAFSFQTTLDEKIC
DAELLFILKEKLKTYFGDDTTSYTSFLFFSRGTKQQPSYVMWTNCTIRTD
ICDFRHINEITAKLFVDDQSLVVKPALIEALKPEFTDLSVLEEKLGPCDA
NEVLSVGLSPDPICVDSCGEFIYKLNDSMFIDPEDGNTSKLIIEMTNKDS
TPLAPNSWIQFDQVNKEIVGFPSESVIVNEPSEGYVYLINAYDSQGAAAS
VPVTFKMCRGLPSYDGSVTVKLKCNKTITKAIHIVEDTLHRISEAYYDGT
LADFFLVNYQLKMNDMNFTWTNCTGSVDFDLEQLQNSLNDSDCQPINVTI
TDHKDYPPIVVRDNLRFDISFCHPKNYTIPFDSIVDGEDGDLRNMTVYLA
FQNMQPLPSDYFLALYKDSLEVIFMAANQTKSKIIYEYYLVAVDKRNQTA
RMMLYFEVMDDFPPVNYLIGTKLRAPSNIATIQSINDYFDAINQYRNNNS
TWLVNDYRGFSNGTIIIRYTQCTHSYPKCDHKNIETFRSTFMSEDGQINP
DVIAAMFPRFRVQSMDIERYKDCLLEPNTPPEKHHNLSVTIKRCGITKYR
IPEDTFFDKEDGNTGNLTLKLYRDEGTQCWLKFNATDQQMTLLYDSGKAG
QTFNFTIQATDVRGESVNATLAVFFEERGRISYQLVFLFDIVETLPCFEE
KYFVSETMLTYFNNTEEIGVASISKGPDNLLMEVVVEHCDMDFSPCNYIV
MDRLTKALQDGNSLKREFIDSFSTDKYIPRYLSQRKGEPCLDRSNTAPLS
QGEIGLVNVTACTNQTDLFLPRDLVMDNEDGDWSNMKKVLYKVLESGGKT
LVTSKDWIQMNGVSIMIIYVRSLANAQPEEGYHFLIDVTDSRGSQIEVPL
TVTFERDRPNITFAINMSLALRQTGTVDSIKSWKVGIEKNLSLTIEVXVD
SIKSWKVGIEKNLSLTIEVLNYMSRRENTILVEWTICGMSKDASRCPYEE
IKKIEQYLMDVGEQVNMTRYGKCLEPPSRPPNSTDVSFILDPCLKINYTI
PEDVFFDDKDGGTSNLTLKVVQNYPTELADFITYDEKRYCFHGIVMLEFF
DRYKRLEYLIQATDSDGLTANATLRFVARNITRQYQFRIHATYFGQPRTE
IAFATEFCYRFEKYLRDINLDAGVTIYNVSTISEQASSSRYDITVTPCAL
TGPVCNKQTSTSITDQLVTTSSQPKFSFIREMLDLIVPDKIDIVKENVCH
NIDWHSEDVKYLKASICNKKQYSKDVLVRNATETTTLVFDNLYPWMAFDE
RSQIISLNPTLREVETQPEDGYLLLYNIRDGNIQSPKQNTSVLIEGDPSD
YNFMIVLHLRPDEAPVTSTLDTTKRLQLINDIQMKVNEITKDTNFNFTTV
IDVNSTSDNILRVFLYDCNLNGEFCQTLLNDELYETFTDSDGSIKASIQN
TFQPKYKLESITTSKRGRCNELPKDRPYVTDEIPPMNLSLCQKLDYRLPK
GLFMDTLDGEIKGERIRLCDEAGNAITSPTYIKYNAQRNSLQVILTQEQL
KKFGDRKLLMFYLKANNSRGEMANTSFVLHLPELPVNNLIIQTYASSPYS
PELKSDLDVLLDVCARIENHIRSTNESISVIGLDRTKDTITIEWTTCNIM
QENCSSEQVNQIMDKIYGDEERIVFHAYYVQKLGENFGYPHIKTNVRETN
YCLYPGGNERPQSTSNVSLVVEQCGYFEKKLDNDIFTDQENGDITNLTLS
MKFTNGSSIKPDYWIQYDDETKIIYGIVDDSVRMEENYTFLLEAVDDSAE
KANGFAFVYLKENATLIRANQENGVISLQCSNKETSSLKTITDILDQIAQ
KISSSPQDIYLKRFFKNETTLVIEYLSCKEIDLSPSKQLVDTAVDSCVVE
DVVIVPKPQPTTTTTTTTRKPKVRETLDIINITCGQPSEYKIKETTFEDD
DGSTSNLTLQVLDKFEDVADYPYLTFNTSTQTITTFVSTKDCQQTDIEDH
YNLQATDKDGNSVISKFEIRKIPKTVSCCMYIQTEVSNIDQLDEKLRFYK
TLQETVYTGNSTSKDIVLVDIYRNSTSNKDIAVYTDGQITNETCFKSNTR
PLTDPVFSDPNMTIVQPSFVQSLNQYEPTDTRAIAEPACNKTVIPVVPPP
PETSAALTDDFIGXYDYIKHCKKYTLEIQHPKILCWWTSTETPHLTKTLQ
FTQTVKSPTKRASNQTRGH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005859XLOC_005859Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010419TCONS_00010419Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008465DAG1
IPR013783Ig-like_fold
IPR030398SEA_DG_dom
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016010dystrophin-associated glycoprotein complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007016cytoskeletal anchoring at plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007016 cytoskeletal anchoring at plasma membrane
cellular_component GO:0016010 dystrophin-associated glycoprotein complex
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008465DystroglycanPFAMPF05454DAG1coord: 762..870
e-value: 2.5E-8
score: 33.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1029..1233
e-value: 0.11
score: 12.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1782..1876
e-value: 0.0012
score: 19.0
coord: 3119..3222
e-value: 0.021
score: 15.0
coord: 132..239
e-value: 0.38
score: 11.0
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 983..1095
score: 15.96
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 2550..2668
score: 12.996
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 1230..1347
score: 18.393
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 242..353
score: 14.709
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 740..853
score: 20.966
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 493..605
score: 20.618
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 2..115
score: 15.638
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 1662..1772
score: 11.267
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 872..977

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010419-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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