TCONS_00010378-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010378-protein
Unique NameTCONS_00010378-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3689

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010378-protein ID=TCONS_00010378-protein|Name=TCONS_00010378-protein|organism=Clytia hemisphaerica|type=polypeptide|length=3689bp
SMDMEERTTLAPAEQSKVLHATKSKDHNANSSTTAKTSSQTTTEEIAQSL
IELSTLPRLEKSPDGEHGNTEKINKDIDVDGQTRNDGRLESAIKQKEEKS
KVENNDSAHQLDKTDVNPNNKKLVIGEGVSSSNEQVDIFKSLQEITNYMS
SDVTLSPTLRGEISKLIPSLVKEFPQESHSDSSKEQSKQSGDEKSDGDVS
ISTATKSPKVLKQPRVCSPINLPSFNNVFTSSIIDSTTSSVSNTKTNFTT
QPLNLKSPPQSPNIPVGAIELILQPATNRPISNKLFVNKEQRKETQIDVK
NANITQGRNQHQQAHYNLPVILPKPSSEYTCYKIPTARQSTPSVFKRSIE
EKMQEFVPIKPQPVTSEGKPKAKVVVKENVTKVDPEVVINNVLIDCFARN
KHLKQADRKVGNVVTATQGSLVKLVPTIQQVVSPTPPLTPTQLLVPPLVQ
HQLDLDILQQANVFPLKTKTIREPNEQHFMNIAAHIESVDGFQDVNGKRY
MKVKRTFFSLEEVSSAHQDFIRQAMADRPLSKTHQTVEDVSPKLVAKSTS
DVGVQVSTLSAIKERQVTSNALKTSAVAKLANNLKNNREEKMKSTQEDKA
TSTEDLVELDQSMESESDNLIISLDDETMDVDENHSNSSSPTENADEETL
HLDVTSITTDDVTSAKCATALKISSAQETAFSRGQKLTNNITANQVPPMR
KNLSKSSENLDTNGKTSEKSNEIQLKNITFADGETENFFKSLTYDRNLKL
NPILMTAENQQETKDFKEFDFAGTLAKARVSSKVAQQQGKEETCKKCQRK
LYGSLAIKSHALTYSKFKCPRCLQQICDQTKLYKHIKSHLQFKFQCQKCL
KAFDQYSAFKEHLKSVHMSDVSRMKALKKTTPWKCDSCKKQFKTFLAASK
HKVKFCTKDWGEQSCCKVCSKMFRDATKLEAHKKLHRQEPIAEDTHKMKL
NQKLAYRKLQIKKSVKLLHNKKHYCTRCVHGFKDCESFYAHINKRDCTYL
KDDGVCMLCKKMFHSLNALQVHVKSCFKETLVGLLKPKKSCSSESESERE
DNKRAVYHCTKCRRMFPSKFIYHKHCILYHFKPKTLQCNRCLFKCQSRSL
LKKHLNNRKCPRLNAFQCYLCNPKDVKTPLKFKSLRTLLKHLNSHKKVEK
MKPKQCKVLPVKLTLKDGREKLLTFSKEDAKRLVGKYHYVHHASQVFAVT
VKMVNNDYEVVLANKQHTKKETALSPQLKVAMIPNPTKPPEESTFKVNIN
KNPKDTSAIIKSPTSSTIKPPTSSTVKSSTNSKLIATSPIKSPTRIPKPS
MESLSQKAESQATVYFCDLCKTVYQTEDKLKTHYYEAKHFSRSRSIGRNR
FDERRFTWECYICNKRINDPFNHATKHAEWMLECYRCTVKVTTIESLVKH
FERKHSERGYTEDDRAFYDHFQGQMVWQKVQIMFMFRMSKPNQTDIDDLD
ANSRMLTQSVHKCEGCNTSFMHKKTLQRHQEKTCMPSQSMMPSPAQEMPS
PRPKQSVDVSDTDKVPPPKAKKVKKIAHRRKSNNVDESPTKNAANKSQES
NPSEPDCSPKKKGQLNPNLTPSNTSSKSVPKNKSNGKTASKSTSKSTAIT
QAVGSEKPTQIPIKEMNSPESVISPSRKKTGGRNKDVLYQYFKCSLCHSV
FTLYQEVIDHFSERHSLVKQYLEPGIMCAKQNQLHTCVNCGLVYSCSHAM
LICRLSHIGIEVETCSVCLDTLPTKTSLQYHMLGKHKSLFCHICYKGFHS
YQDLLNHCQLHVHEILIPRDENGKMMIEIGTTNNPKTFLFDKQTEEESEK
FLCTSLIPPNVIADNRLFYCAICQQNIEGELTHIVHMKTHQSKRPLSCLV
CHQRFDSVDELNEHHKTNSHKKQRNTFDDRVLRLPTGHICFLCFLVFEDS
TSLRQHQSDHAKPISDEELKKSLSIMNSVNSYVMRSSEPHDKNNNAVDWP
EDLKCVEKFCGIERLVARDLLSNMHAGKGPDLQHNWNCCTKKAKVFCPIC
SSNVDELSEHYQTVHLDSGKPSSIFCCQKEFKTYVEVVSHTKQRHGKMLK
SGRSLFMCPHCFVPETYVHIMGHHEGISFTSQTIRCSYCNLLFHQNNFRE
HLRSKNPRQACVDCSRSSALTNSLVSDPSVNISESSNKKLVEISNTSDIP
ATSYKLKEKENSTNIPGSSKFVLAGSPRKSRKVKKIRQDIKPDVSNAKTT
KAKMETKRSARDVVSKYKKLNNKSITPTINKNKDNPSPQKKKAIKTIMAE
MREGKKKRAEAQKVDKQAIATSQPMVQDLPAPTFTSRRKSATKAENKIKA
LDQVEKRSPSTTKTKVKDLPKKTVEVAKGKESPKIKVIEEAKEKKRQKHV
SVFNKQSKTAAVEKSVPIKPVKPSPSKPVKPSPSKPVKSTPSKPVKSSPS
KPVKSTPSKPVKSTPVKDTLIKAKRKSNFGGEDKENKTTKVKNDDKQQSK
SPKKIASQDEDKSEEDTSAEPNAPKDETTVCKEREIQQLDATYQKILELA
DGTCKLCTWNFQTYDELKDHLLRHQIVKDDISGDVTKATCHLCGKMSVIN
QMNKHIVLQHNKEVNAHRKKRKTEDDTNKRLSFSQAVNSLYDSKFMCCLC
NQSQQTLDGYLKHFETSHLALLDLELEKFNVNSNTQVIQDLHQYKEKKNP
GSQAKTPKDTATPKQTPQRRKSTWVMGIPAPTTFPYPHSCIVCGKGFYTR
GQCSLHLKNIHPWFDESNTELVAKFTSQHTTPATVTVERLPSPLLQGKMP
SETSTIDENASTERAAKRKKATSSDKKTNLLHSQNVELRIENLLAAKKKS
PPKNSSGNTRKIIRPGKPPSAFKKRKSRLNVAKDDRDEMDANVSTSDVEE
EPVKDDVQMEIVGVEGNESDVSSSSSASEIEEETEEEIIESSSDEEGEGK
VACKRKDLKKTTKADYVDEGFQQEKKHDQKMDIPTDEVTHEKKDEEVNQD
ARVVEQIDDAVNTSSSETKKTDVVEDEDSTQEKGEEKNAEEKKDEEKKDE
ETHLTNDENPQRETGEAKLDTESSTSLDSNLTTLESEKVGESNQLTDVNG
EKQENEQSTNGQAIASSFDVTDKPVQESTKPAKSPITLKPKPSKDEENVT
KFISREVSTVHDDSIAEDSKIFKRDPDPLGLSIKPKEDALVININQQLPL
LSPKDLEHEKFFEGSTTPTGGIIIEQENDPNISKTPLQSHSNGGHFATNY
PLVCLFCGQGYYTRFSLKSHLIVKHANCYTTDLEKTNSFVNLDYPDVHAT
ISGDTQVEEVPKPRRSRAKFEEVMRSLKPVSRPTNKAASSQHKSQTSSST
SKAGQKRKMSVSVSPKTKKKKPALKEPVDEESEEIEEKSSDAETQSSDDD
EDEKEEEKVQKKKGKLTKKVKYADKCEWCDQLLRNKSELEKHVERHFKGS
KLNLLTCDSCFCLIERHLLKRHMHMEHDDVPLSKKRLWCKHCNYSTRSHT
PKNLDKHIYEKHPFMLKIECRICDARFPTTAAYNEHFADTHGKSLDEQSM
ECLFCNKKFQTLNKLYCHFSIIHMKKNKDLYCELCCKYFYGRTDLDNHQE
EFHKNDNYQCGLCLVDFTSAEVCEKHVMVHKTVTENQCDICKFYFDSEET
LTKHKVTHVDENSVPVQNSEAGGQELTSNEDALAEGSITEGNRTNEETDV
EMNSLPFDNTCTNCNETFLRREIFEEHVKKCGKKTYDES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005837XLOC_005837Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010378TCONS_00010378Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 577..597
NoneNo IPR availableGENE3D2.40.155.10coord: 1020..1315
e-value: 2.2E-5
score: 24.1
NoneNo IPR availableGENE3D3.30.160.60coord: 3512..3539
e-value: 0.042
score: 13.7
coord: 815..854
e-value: 1.9E-5
score: 24.4
coord: 3435..3478
e-value: 0.29
score: 11.0
coord: 1725..1748
e-value: 0.046
score: 13.6
coord: 3570..3595
e-value: 6.1E-5
score: 22.8
NoneNo IPR availableGENE3D2.10.69.10coord: 2589..2713
e-value: 0.25
score: 11.1
NoneNo IPR availableGENE3D2.20.28.10coord: 1447..1474
e-value: 0.041
score: 13.6
NoneNo IPR availableGENE3D3.30.160.60coord: 3387..3433
e-value: 0.25
score: 11.3
coord: 890..928
e-value: 4.7E-4
score: 20.0
coord: 1475..1671
e-value: 3.0E-4
score: 20.6
coord: 929..1019
e-value: 0.037
score: 13.9
coord: 1316..1411
e-value: 0.062
score: 13.2
NoneNo IPR availableGENE3D3.30.160.60coord: 1900..2513
e-value: 0.24
score: 11.1
coord: 3198..3386
e-value: 2.5E-4
score: 20.6
coord: 1749..1828
e-value: 0.057
score: 13.1
coord: 1858..1899
e-value: 7.0E-6
score: 25.6
coord: 1682..1724
e-value: 0.0097
score: 15.5
coord: 3540..3569
e-value: 0.002
score: 17.7
coord: 3479..3511
e-value: 0.0019
score: 17.8
coord: 3596..3683
e-value: 2.1E-4
score: 20.9
coord: 1829..1857
e-value: 4.7E-6
score: 26.2
NoneNo IPR availableGENE3D3.30.160.60coord: 2514..2580
e-value: 0.1
score: 12.2
NoneNo IPR availableGENE3D2.20.28.10coord: 855..889
e-value: 3.1E-5
score: 23.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2794..3097
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 3614..3651
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2646..2671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1254..1283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2744..2778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1477..1630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..604
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 697..719
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 3254..3364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2276..2481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..120
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 2502..2524
e-value: 0.46
score: 19.5
coord: 883..903
e-value: 270.0
score: 0.6
coord: 1846..1870
e-value: 0.53
score: 19.3
coord: 3374..3396
e-value: 5.9
score: 15.3
coord: 1713..1736
e-value: 0.34
score: 20.0
coord: 914..936
e-value: 2.0
score: 17.4
coord: 3437..3462
e-value: 62.0
score: 6.3
coord: 1642..1665
e-value: 2.3
score: 17.2
coord: 2595..2618
e-value: 44.0
score: 7.6
coord: 817..839
e-value: 4.4
score: 16.3
coord: 1315..1339
e-value: 0.62
score: 19.1
coord: 1995..2015
e-value: 19.0
score: 10.8
coord: 3468..3491
e-value: 0.06
score: 22.5
coord: 844..867
e-value: 0.0058
score: 25.8
coord: 1116..1145
e-value: 10.0
score: 13.2
coord: 3558..3580
e-value: 1.9
score: 17.5
coord: 3586..3608
e-value: 0.14
score: 21.2
coord: 3500..3523
e-value: 19.0
score: 10.9
coord: 1888..1910
e-value: 2.9
score: 16.9
coord: 3202..3225
e-value: 0.25
score: 20.4
coord: 1461..1481
e-value: 50.0
score: 7.1
coord: 1382..1405
e-value: 24.0
score: 9.8
coord: 2688..2711
e-value: 0.056
score: 22.6
coord: 2538..2560
e-value: 35.0
score: 8.5
coord: 1057..1080
e-value: 14.0
score: 12.0
coord: 3530..3553
e-value: 10.0
score: 13.2
coord: 2084..2103
e-value: 250.0
score: 0.9
coord: 1004..1024
e-value: 40.0
score: 7.9
coord: 1739..1761
e-value: 5.8
score: 15.4
coord: 1818..1840
e-value: 16.0
score: 11.4
coord: 2024..2045
e-value: 220.0
score: 1.4
coord: 3659..3679
e-value: 120.0
score: 3.8
coord: 1086..1106
e-value: 130.0
score: 3.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1317..1339
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1644..1665
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 3470..3491
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 3532..3553
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 3502..3523
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 3204..3225
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 2690..2711
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 3560..3580
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 3376..3396
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1741..1763
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1890..1910
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1820..1840
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 846..867
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1059..1080
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1848..1870
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 3588..3608
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 819..839
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 915..936
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 2504..2524
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 914..941
score: 10.014
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 3586..3613
score: 9.349
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 844..872
score: 11.219
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 3500..3528
score: 8.663
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1818..1845
score: 9.12
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 3530..3558
score: 9.328
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1846..1875
score: 9.39
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 2688..2711
score: 8.995
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 817..844
score: 8.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010378-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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