TCONS_00010328-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010328-protein
Unique NameTCONS_00010328-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length531

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010328-protein ID=TCONS_00010328-protein|Name=TCONS_00010328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=531bp
MGSDNYDSSTKEDEDDVDDIKLTGCGALPCCDPRSAGHRFTVLIFICFLS
FGSYFCFDNPAALQKQITTDMKVNTEKFMLLYSLYSWPNVVLCFFGGFLL
DKVFGIRLGTIIFGLFVCVGQVIFSLGAVFDSYTMMEAGRFVFGIGGESL
AVAQNTYAVSWFKGAELNMVFGLQLSFSRVGSTVNMNVMGPMYKFLEKRI
DKESYVILGWTLMVGFLFCLLSLFCSLAMAFFDKRAARILKKQDAQTGEE
IRITDVKDFPLSVWLIFIICVTYYVAVFPFISLGLVYFEAKYDLDASKAN
IVNSLVYLISAGASPILGLYVDKVGYNLYQLIAAICMTIGAHAMLAFSTT
ISPYIAMSVMGIGYSLLACALWPLVAMIVPEYQLGTAYGFMQSIQNLGLA
VVSIIAGSIVDNRGYLILEVFFLACLSLALISSILLYLSDLSSKSGLNLS
AKVRKEAKSNAKTEINNVASENKPLLENYYTKPPQGTSSVNIQPRSAAAL
RYQFIAKLGGPTVQMPETFRTSAFIFPHVLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005794XLOC_005794Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010328TCONS_00010328Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 261..444
e-value: 9.6E-23
score: 80.0
NoneNo IPR availableGENE3D1.20.1250.20coord: 36..249
e-value: 5.9E-21
score: 74.2
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 47..401
e-value: 1.3E-27
score: 96.6
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 39..444
score: 12.207
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 43..438
e-value: 2.43564E-29
score: 116.644
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 32..437

Blast
[Close]
BLAST of TCONS_00010328-protein vs. Swiss-Prot (Human)
Match: MFSD1 (Major facilitator superfamily domain-containing protein 1 OS=Homo sapiens GN=MFSD1 PE=2 SV=2)

HSP 1 Score: 549.28 bits (1414), Expect = 0.000e+0
Identity = 271/428 (63.32%), Postives = 342/428 (79.91%), Query Frame = 0 
Query:   31 CDPRSAGHRFTVLIFICFLSFGSYFCFDNPAALQKQITTDMKVNTEKFMLLYSLYSWPNVVLCFFGGFLLDKVFGIRLGTIIFGLFVCVGQVIFSLGAVFDSYTMMEAGRFVFGIGGESLAVAQNTYAVSWFKGAELNMVFGLQLSFSRVGSTVNMNVMGPMYKFLEKRIDKESYVILGWTLMVGFLFCLLSLFCSLAMAFFDKRAARILKKQDAQTGEEIRITDVKDFPLSVWLIFIICVTYYVAVFPFISLGLVYFEAKYDLDASKANIVNSLVYLISAGASPILGLYVDKVGYNLYQLIAAICMTIGAHAMLAFSTTISPYIAMSVMGIGYSLLACALWPLVAMIVPEYQLGTAYGFMQSIQNLGLAVVSIIAGSIVDNRGYLILEVFFLACLSLALISSILLYLSDLSSKSGLNLSAKVRKEAK 458
            CDP    HR  VL+ +CFL FGSYFC+DNPAALQ Q+  DM+VNT KFMLLY+ YSWPNVVLCFFGGFL+D+VFGIR GTIIF  FVC+GQV+F+LG +F+++ +ME GRFVFGIGGESLAVAQNTYAVSWFKG ELN+VFGLQLS +R+GSTVNMN+MG +Y  +E  +    +  LG TLM+G + C+LSL C+LA+A+ D+RA RIL K+  +TGE I++TDVKDF L +WLIFIICV YYVAVFPFI LG V+F  K+   +  A+ +NS+VY+ISA  SP+ GL VDK G N+  ++ A+  T+ +H MLAF T  +P+IAM ++G+ YSLLACALWP+VA +VPE+QLGTAYGFMQSIQNLGLA++SIIAG I+D+RGYL LEVFF+AC+SL+L+S +LLYL + +    LN SA+ R+E K
Sbjct:   34 CDPSRLAHRLLVLLLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVVLCFFGGFLIDRVFGIRWGTIIFSCFVCIGQVVFALGGIFNAFWLMEFGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKIEALLGSAGHTTLGITLMIGGITCILSLICALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAF-TMWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAIISIIAGMILDSRGYLFLEVFFIACVSLSLLSVVLLYLVNRAQGGNLNYSARQREEIK 460
The following BLAST results are available for this feature:
BLAST of TCONS_00010328-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFSD10.000e+063.32Major facilitator superfamily domain-containing pr... [more]
back to top