TCONS_00010272-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010272-protein
Unique NameTCONS_00010272-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length626

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010272-protein ID=TCONS_00010272-protein|Name=TCONS_00010272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=626bp
DMKSVNKTLRRFSAGKKKKKDTTQLVVAQSNVGANAVEEMEGYSDTIYNE
LRIVLIGRTGSGKSSTGNTLLGRKAFDDGIGFDAKTSVTRLEQTERDGRR
ITVVDTPGLLDTRKEFTEEHTIREILKCIALTSPGIHSVCLVVEVGRFTE
ENAKVFETLIKLFGEGLKNYLIVIFTHGDQLRRSKMNIEELVKQSQSPEL
RNIINNYSQDYIAVDNTKDYESNPDASRILMKIDELVQRNGGQFYTSESY
QIAEEFFKETMLNKKKKPPRKPPRKNKKQPETKEPTKIESRPLPRLYEEH
SYGFSRDGKVSHTSYSGENVYDRPPTRATVKKKESDRNYGSASGQYEAVT
ESPQQPTWSDSNPYESRYSHIPLPSLYERDIQTPFTSTALDGSNLSVQQS
VESPYQSMHSPDNAYKAQTPLAIFRAVQCPQYEKISLVGNAAESPKAEER
KVENQQVAKPRKPRKEESKIQYMAWLTDKKPSGTSSKEEEEDSNQSQIEM
DQRNRFNSQFIESQIAYMKKLEESRLQTLKPKDDVKKQVAPQHLLQEQEE
DPVDQAPDQAAEGVDPEQARYEEEARADFRDQVQNDDGGFLDKLQKKFEN
LQKGFKDICKKIANIFRKKRGEADIE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005776XLOC_005776Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010272TCONS_00010272Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006703G_AIG1
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006703AIG1-type guanine nucleotide-binding (G) domainPFAMPF04548AIG1coord: 51..256
e-value: 3.0E-51
score: 173.6
IPR006703AIG1-type guanine nucleotide-binding (G) domainPROSITEPS51720G_AIG1coord: 48..254
score: 41.212
NoneNo IPR availableGENE3D3.40.50.300coord: 1..113
e-value: 1.2E-13
score: 50.4
NoneNo IPR availableGENE3D3.40.1450.10coord: 114..276
e-value: 3.5E-13
score: 49.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 527..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..362
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 49..259

Blast
[Close]
BLAST of TCONS_00010272-protein vs. Swiss-Prot (Human)
Match: GIMA4 (GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.365e-37
Identity = 79/209 (37.80%), Postives = 127/209 (60.77%), Query Frame = 0 
Query:   49 NELRIVLIGRTGSGKSSTGNTLLGRKAFDDGIGFDAKTSVTRLEQTERDGRRITVVDTPGLLDTRKEFTEEHTIREILKCIALTSPGIHSVCLVVEVGRFTEENAKVFETLIKLFGEGLKNYLIVIFTHGDQLRRSKMNIEELVKQSQSPE-LRNIINNYSQDYIAVDN-TKDYESNPDASRILMKIDELVQRNGGQFYTSESYQIAEE 255
            ++LRIVL+G+TG+GKS+TGN++LGRK F  G    + T       +      + VVDTPG+ DT  E     T +EI++CI LTSPG H++ LVV +GR+TEE  K  E ++K+FGE  ++++I+IFT  D L     N+ + ++  ++PE ++++++ +   Y A++N     E     +++L  I  +V+ N    YT+  YQ AEE
Sbjct:   29 SQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELVVVDTPGIFDT--EVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKMFGERARSFMILIFTRKDDL--GDTNLHDYLR--EAPEDIQDLMDIFGDRYCALNNKATGAEQEAQRAQLLGLIQRVVRENKEGCYTNRMYQRAEE 231
The following BLAST results are available for this feature:
BLAST of TCONS_00010272-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GIMA41.365e-3737.80GTPase IMAP family member 4 OS=Homo sapiens GN=GIM... [more]
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