TCONS_00010246-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010246-protein
Unique NameTCONS_00010246-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010246-protein ID=TCONS_00010246-protein|Name=TCONS_00010246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=181bp
MSTQRGNTTKKRAQKHKNITKFINDKYDTTGKMKQINQLVVSNVCQRCKD
CIEWKIKYKKYKPLTVPAKCKKCDLKKVKYAYHIVCSECAVSLKICAKCS
MEKEVVGEVEKSTSEKQREESLLREELKFMRLREKRTLMRQLEKGEKVKV
DMNENKDEEDEEDDEDDENESGEEDEIEPEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005763XLOC_005763Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010246TCONS_00010246Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019351DUF2039
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..181
IPR019351Protein of unknown function DUF2039PFAMPF10217DUF2039coord: 14..100
e-value: 2.7E-28
score: 98.0

Blast
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BLAST of TCONS_00010246-protein vs. Swiss-Prot (Human)
Match: CI085 (Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 4.369e-33
Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 0 
Query:    1 MSTQRGNTTKKRAQKHKNITKFINDKYDTTGKMKQINQLVVSNVCQRCKDCIEWKIKYKKYKPLTVPAKCKKCDLKKVKYAYHIVCSECAVSLKICAKCSMEKEVV 106
            MS+Q+GN  + R QKH+N   F NDK+D + + K+IN  +   VCQRCK+ +EW++KY KYKPL+ P KC KC  K VK +YHI+C  CA  L++CAKC  ++++V
Sbjct:    1 MSSQKGNVARSRPQKHQNTFSFKNDKFDKSVQTKKINAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKKEDIV 106
The following BLAST results are available for this feature:
BLAST of TCONS_00010246-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CI0854.369e-3350.00Uncharacterized protein C9orf85 OS=Homo sapiens GN... [more]
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