TCONS_00010196-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010196-protein
Unique NameTCONS_00010196-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length339

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010196-protein ID=TCONS_00010196-protein|Name=TCONS_00010196-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
LMIAVCTMVTTIQSDTIEDTMNNNINVGASENEPHFRLLKYRDVYELAKK
RLHNPLHLEELAKKLKKMDKTEMMYKRQRDTGDSEYDATAEKQIQNLLPD
ILHQYGVLEVDETWHSKPMHFEDARLQRIWQLAIDEANYNGDELRELHNE
LHAMQKKLSNYIWTVRQLESLKEKENNETNNYVSDDVIDNSVDGKADEEE
KTNVESLKSKVKNEFGSLDEEVFALKDKVAMRIKQDKLGELTDSRVRELM
EKAKEMMLEKDLQKFKSELDHFQNRISKLEHWRKVSENLRKHLEENQFEK
ELVDEYQFSKAKVKELTKFVKKYHTTLYNRLYKNYKNEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005720XLOC_005720Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010196TCONS_00010196Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010483Alpha_2_MRAP_C
IPR009066MG_RAP_rcpt_1
Vocabulary: Molecular Function
TermDefinition
GO:0008201heparin binding
GO:0050750low-density lipoprotein particle receptor binding
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0008201 heparin binding
molecular_function GO:0050750 low-density lipoprotein particle receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableCOILSCoilCoilcoord: 255..275
NoneNo IPR availableGENE3D1.20.81.10coord: 119..237
e-value: 9.2E-5
score: 22.7
coord: 239..326
e-value: 0.05
score: 14.0
coord: 34..113
e-value: 0.11
score: 12.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..203
IPR010483Alpha-2-macroglobulin RAP, C-terminalPFAMPF06401Alpha-2-MRAP_Ccoord: 121..336
e-value: 4.7E-19
score: 69.1
IPR009066Alpha-2-macroglobulin receptor-associated protein, domain 1SUPERFAMILY47045RAP domain-likecoord: 118..222
IPR009066Alpha-2-macroglobulin receptor-associated protein, domain 1SUPERFAMILY47045RAP domain-likecoord: 35..110

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010196-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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