TCONS_00010037-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010037-protein
Unique NameTCONS_00010037-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length401

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010037-protein ID=TCONS_00010037-protein|Name=TCONS_00010037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
MALQARGKNIFILVLCFAFFLNNVSGAVEIIVTDCQTVELEFHVTMFTLK
LSENIDQPINLKLESDEKSIAFPLKSNFTFLPEHGTMPQIVFVYGNEVGS
THINVTDGRNVSLLPDGTHPIANKEVQVRVVHSLTLQSINVVIGWVYFLA
WSISFYPQTIENFRRRSVVGLNFDFLCYNLTGFLAYSFFNVGLFYVKSVQ
DEYFAQYGGSVIPVQPNDVFFALHAVVLTIVTITQCFFFDRGDQRISNIC
KGLTSVAWLFAGISLVVTLTGKINWYTYLNFFSYIKLGITLIKYIPQAVM
NYRRQSTVGWSIGNVLLDFTGGSFSLIQMFFLAYNNNEWNSIFGDFTKFG
LGFFSILFDILFMTQHYILYRHSREYTPIEDNEKQHDDHKDANVNKPVSA
I
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005626XLOC_005626Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010037TCONS_00010037Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt
IPR005282LC_transporter
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatSMARTSM00679ctnscoord: 153..184
e-value: 3.6E-7
score: 39.8
coord: 292..323
e-value: 1.5E-9
score: 47.8
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 140..195
e-value: 4.2E-17
score: 61.6
coord: 279..336
e-value: 3.2E-19
score: 68.3
IPR005282Lysosomal cystine transporterTIGRFAMTIGR00951TIGR00951coord: 141..370
e-value: 2.1E-86
score: 287.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..401

Blast
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BLAST of TCONS_00010037-protein vs. Swiss-Prot (Human)
Match: CTNS (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2)

HSP 1 Score: 298.901 bits (764), Expect = 6.459e-99
Identity = 141/253 (55.73%), Postives = 185/253 (73.12%), Query Frame = 0 
Query:  124 KEVQVRVVHSLTLQSINVVIGWVYFLAWSISFYPQTIENFRRRSVVGLNFDFLCYNLTGFLAYSFFNVGLFYVKSVQDEYFAQYGGSVIPVQPNDVFFALHAVVLTIVTITQCFFFDRGDQRISNICKGLTSVAWLFAGISLVVTLTGKINWYTYLNFFSYIKLGITLIKYIPQAVMNYRRQSTVGWSIGNVLLDFTGGSFSLIQMFFLAYNNNEWNSIFGDFTKFGLGFFSILFDILFMTQHYILYRHSREY 376
              ++  V+ S  +  IN VIGW+YF+AWSISFYPQ I N+RR+SV+GL+FDF+  NLTGF+AYS FN+GL +V  +++++  +Y   V PV  NDVFF+LHAVVLT++ I QC  ++RG QR+S    G   +AWLFA ++++V   G   W  +L  FSYIKL +TL+KY PQA MN+  +ST GWSIGNVLLDFTGGSFSL+QMF  +YNN++W  IFGD TKFGLG FSI+FD++F  QH+ LYR    Y
Sbjct:  111 PRIRFLVIRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKRPGY 363
The following BLAST results are available for this feature:
BLAST of TCONS_00010037-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTNS6.459e-9955.73Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2[more]
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