TCONS_00010000-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010000-protein
Unique NameTCONS_00010000-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length485

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010000-protein ID=TCONS_00010000-protein|Name=TCONS_00010000-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
MEAEDSNPFLSDEPSEIDSKNPFDDTGDFMDGGGDLDETPDFDFEASKPT
LQVEEKSPPANLPTYTSLEEEQVHTIMRSVSMEDTDTLEDRKKAMSDSQD
LFVKVDSPEKHVEGYVSYGVITQTTRTEFEKAEYKVRRRYQDFLWLRHKL
EESYPTHIIPPLPEKFSFTKNLTDKYDADFLKTRQKALDKFMCRVVDHPV
LSFNQNLKTFLSAKAWEMTTARKKAPGAASKVGGSVKNTAAQLMMKNRDE
LFTEQNQYNTAFQAKTKSFLTIADMIAQDRFFLLEDSTEYGSAFRLWANS
ESKLAETLNGVSESIDKSCVNLKSILRIQELRFCEPIREYNLYCDAVKYA
SKRRDQIQMEQELVTEELAKRRAEKEEVESGEAKSFAQFFGKDPEKAKEE
RLTKLNQQIRDLTAEVETLANNRAKADEDFKADLERWNASKKSDIKALLM
DLADKHIKFYESNIAAWQGSLEVIGKPRKMPANME
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005610XLOC_005610Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010000TCONS_00010000Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR015404Vps5_C
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 356..376
NoneNo IPR availableCOILSCoilCoilcoord: 395..429
NoneNo IPR availableGENE3D1.20.1270.60coord: 232..479
e-value: 2.6E-19
score: 69.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableCDDcd06860PX_SNX7_30_likecoord: 101..214
e-value: 3.20153E-60
score: 194.092
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 97..214
e-value: 2.0E-15
score: 67.3
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 91..231
e-value: 2.8E-31
score: 107.7
IPR001683Phox homologous domainPFAMPF00787PXcoord: 107..212
e-value: 6.5E-21
score: 74.3
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 96..218
score: 17.466
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 96..215
IPR015404Sorting nexin Vps5-like, C-terminalPFAMPF09325Vps5coord: 235..468
e-value: 1.8E-7
score: 30.9

Blast
[Close]
BLAST of TCONS_00010000-protein vs. Swiss-Prot (Human)
Match: SNX7 (Sorting nexin-7 OS=Homo sapiens GN=SNX7 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.118e-80
Identity = 141/379 (37.20%), Postives = 216/379 (56.99%), Query Frame = 0 
Query:   97 DSQDLFVKVDSPEKHV---EGYVSYGVITQTTRTEFEKAEYKVRRRYQDFLWLRHKLEESYPTHIIPPLPEKFSFTKNLTDKYDADFLKTRQKALDKFMCRVVDHPVLSFNQNLKTFLSAKAWEMTTARKKAPGAASKVGGSVKNTAAQLM-MKNRDELFTEQNQYNTAFQAKTKSFLTIADMIAQDRFFLLEDSTEYGSAFRLWANSESKLAETLNGVSESIDKSCVNLKSILRIQELRFCEPIREYNLYCDAVKYASKRRDQIQMEQELVTEELAKRRAEKEEVESGEAKSFAQFFGKDPEKAKEERLTKLNQQIRDLTAEVETLANNRAKADEDFKADLERWNASKKSDIKALLMDLADKHIKFYESNIAAWQGSL 471
            D +DLF+ VD PE HV   E +++Y +IT+T+R EF+ +E++VRRRYQDFLWL+ KLEE++PT IIPPLPEKF   K + ++++ DF++TR+KAL KF+ R+ DHP L+FN++ K FL+A+AWE+++ +K+ PG  S++G +V+  A+ +  +KNR E F E N +   F  K      I+  I ++     ++  EYG    LW+ SE  L +TL  V+  ID+ C   +  +          + EY LY + +    KRRDQIQ E +   E L  ++A+ +                            L ++I  L  +VE  ANN        KAD ERW  + ++DIK    D+A+++I +YE  +A W+  L
Sbjct:   28 DLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKF-IVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTD---------------------------LLPEEIGKLEDKVEC-ANNA------LKADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFL 371
The following BLAST results are available for this feature:
BLAST of TCONS_00010000-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX77.118e-8037.20Sorting nexin-7 OS=Homo sapiens GN=SNX7 PE=1 SV=1[more]
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