TCONS_00009985-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009985-protein
Unique NameTCONS_00009985-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1892

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009985-protein ID=TCONS_00009985-protein|Name=TCONS_00009985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1892bp
MESQPSDEHITMLMGMGFGDITDIRRALKLAKNDLNDAVAILTGEDSRGG
FGQADIEMKEVSNSTEVYNNNNSPVMFGPQLPVVEGGKQPTECIDITEEE
EVAENIDMAIEDMPDEFPTTNMYELEDRVFTENWSIPYKKGESLAKCLYG
AIKLASQQKAETDKDCERFLDRVAVECFKKLLTSQAVKKWSNDIHEGVFN
MIQLFIDFMAERLKYSPPPLKLLGTLSLAFDPDSEFHFKNRTHKWNRGHY
EDIFGFDKCPAVSPDYNTYKAPFGWLVDLINRFVQKGGLDSIIDIVETMD
KMSPNVLASLLKPFGACAVYLNAEVTGYKLGGMADKVVQFVSQMEADDMK
DKDVDKVYDLLRSLRKVCDVLWADKTSNIVELHLSTILKMLQLPQFNPRM
NALKELSRLIKDAERNQCKEITVDVISKWLLDNKVLSIAFSSSLHHAQYS
EKLQKIVDFASSKISLEELTTIWDMQIGKHITVVDNIHSIISSAIQNFSV
EQMEHFLKLLEKSWDEEDDKSKERLLLLLGKVGREIKDNQIVTQILDLLW
NFSHLEEDLPLYLINQAVQSHIDVLCDSSLITIATKTDYVSKCVQDIKNN
TWVVPGIRHILCNLESIAKKNMKNTRPTIQDIQQNNQLMKLLTSSLSQSH
KTATSSILPGTLSGETIINNSYKYAEIIMTHLKLIQFLLKDGNLYLSYGR
AKEIWDCLMLDENNCDGDYETCLEWFYECIRDLQADTLKELFTQKLLKTD
VSRMKEMGLKCFIAYFETVNTNEHRIHRSGSSLVVDKTELIGMPYLWQLV
LKSPYGNIAEEATQYLIDVSFSWLSNKLKKVDSFSIHKKFMGECCKRLEH
LLSQLKENEDCSPKEGKITRTFKKPHPIKGSSIERSKVFLSIERLLHLTC
NYIITVEDGYALPRAFPSHGSCYHGYPIQIHITCESNKTEIDVMSHSNER
LSAVRQKIANKLDCPVEGLQILMNDKTLLSDKDHKLLLQLSFEKKQNLTA
KLLATIKATSGGATGTLLSASASSSASNDSVSPVNKMDREKCLPGFLLAV
EYRIFDKLYTLAELEEPQITCVLRNLLQQLPTDGDVLQAIDVFSFQNPML
CSPGTRAGYTTSSTSVLENYFKCTAPKMSTFRVLYNLQVLSSKLMPVLGI
DAPNVTQSFRENWLNAGGLRLIMNILLPDTLPSNADYELRQSCYYIILQL
ARFLLCGDEIDMEPNSPPYPAVVRTYGQTSADDTPLLQHAVSLNTTATDS
QADVSMNSTSTPIKVGNTSSISNQSHSPVASSWPGARAAANDSPGSVREL
SSSPGGNAASFTPDGNLRKRLRSTSSVLESVSPTVKMVIENINEEEFKEI
ISSLLQVSWSAAAGQLQLNTKQNSTTPVASSSGEAYSNPFTHSKQQTSSN
SSMLHYQLKAGLCLSQETVSIMDSVLANNSLELLVMCLQLRPNLMDLFYK
LPNVDDFIVDVLTGSPSFEVRAAASLHFSVLSMTLNNTMDTHPKAFLIKT
LLKAHLPVWNISGTIRGHAYKILTQCEQYFELLSNLLCQLSLSAQTEYNI
NPSQLLEGELNFLQNSDNLNVEMLTGHLSFSSALFTCEGIDKTTQGCRFL
TYLLNEFLFSASKLEHANTSLSTFSVLDINIHSFNSQCRQQAFNLLLTTA
DRCPGNIASIADELTRRHHNQVISKEWAFQPAISARPANGFVGLSNAGAT
CYMNSILQQLYMQPGIREALLKVEDQQSTTKDTILSQVQNIFGHLLESQT
QFFKPEGFWKTFKLWGEPVNLREQQDALEFYTNITDQLDEHLKTLKKEEI
FKKAFSGTFVDQKTCSDCSHCFERDEPFSSLPVTVKSGNLEASLEQFVHT
EVMEGENAYYXTTRHREIRKFRSLLGTVCPHGGHGGRECVLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005605XLOC_005605Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009985TCONS_00009985Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR016024ARM-type_fold
IPR009060UBA-like
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0005488binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 6..44
e-value: 0.0016
score: 27.7
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 7..42
e-value: 1.1E-4
score: 21.9
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 5..45
score: 10.041
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 1692..1802
e-value: 2.2E-18
score: 66.6
NoneNo IPR availableGENE3D1.10.8.10coord: 1..43
e-value: 1.2E-8
score: 34.1
NoneNo IPR availableGENE3D3.10.20.90coord: 915..1005
e-value: 6.4E-4
score: 18.9
NoneNo IPR availableGENE3D3.90.70.10coord: 1683..1878
e-value: 7.5E-41
score: 139.4
NoneNo IPR availableCDDcd14286UBA_UBP24coord: 7..43
e-value: 1.12454E-15
score: 72.8662
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 1688..1864
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 1693..1708
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1692..1892
score: 21.32
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 174..634
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 3..44

Blast
BLAST of TCONS_00009985-protein vs. Swiss-Prot (Human)
Match: UBP24 (Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3)

HSP 1 Score: 859.366 bits (2219), Expect = 0.000e+0
Identity = 496/1265 (39.21%), Postives = 747/1265 (59.05%), Query Frame = 0
Query:    1 MESQPSDEHITMLMGMGFGDITDIRRALKLAKNDLNDAVAILTGED---SRGGFGQADIEMKEVSNSTEVYNNNNSPVMFGPQLPVVEGGKQ------PTECIDITEEEEVAENIDMAIEDMPDEFPTTNMYELEDRVFTENWSIPYKKGESLAKCLYGAIKLASQQKAETDKDCERFLDRVAVECFKKLLTSQAVKKWSNDIHEGVFNMIQLFIDFMAERLKYSPPPLKLLGTLSLAFDPDSEFHFKNRTHKWNRGHYEDIFGFDKCPAVSPDYNTYKAPFGWLVDLINRFVQKGGLDSIIDIVETMDKMSPNVLASLLKPFGACAVYLNAEVTGYKLGGMADKVVQFVSQMEADDMKDKDVDKVYDLLRSLRKVCDVLWADKTSNIVELHLSTILKMLQLPQFNPRMNALKELSRLIKDAERNQC--KEITVDVISKWLLDNKVLSIAFSSSLHHAQYSEKLQKIVDFASSKISLEELTTIWDMQIGKHITVVDNIHSIISSAIQNFSVEQMEHFLKLLEKSWDEEDDKSKERLLLLLGKVGREIKDNQIVTQILDLLWNFSHLEEDLPLYLINQAVQSHIDVLCDSSLITIATKTDYVSKCVQDIK---------------------NN---TWVVPGIRHILCNLESIAKKN-MKNTRPTIQDIQQNNQLMKLLTSSLSQSHKTATSSILPGTLSGETIINNSYKYAEIIMTHLKLIQFLLKDGNLYLSYGRAKEIWDCLMLDENNCDGDYETCLEWFYECIRDLQADTLKELFTQKLLKTDVSRMKEMGLKCFIAYFETVNTNEHRIHRSGSSLVVDKTELIGMPYLWQLVLKSPYGNIAEEATQYLIDVSFSWLSNKLKKVDSFSIHKKFMGECCKRLEHLLSQLKENEDCSPK-EGKITRTFK----KPHPIKGSSIE---RSKVFLSIERLLHLTCNYIITVEDGYALPRAFPSHGSCYHGYPIQIHITCESNKTEIDVMSHSNERLSAVRQKIANKLDCPVEGLQILMNDKTLLSDKDHKLLLQLSFEKKQNLTAKLLATIKATSGGATGTLLSASASSSASNDSVSPVNKMDREKCLPGFLLAVEYRIFDKLYTLAELEEPQITCVLRNLLQQLPTDGDVLQAIDVF-------------SFQNPMLCSPGTRAGYTTSSTSVLENYFKCTAPKMSTFRVLYNLQVLSSKLMPVLGID-APNVTQSFRENWLNAGGLRLIMNILLPDTLPSNADYELRQSCYYIILQLARFLLCG 1207
            MES+  ++H+T L+ MGF D   IR+AL+LAKND+N+AVA+LT E      GG+   D               +      G                 P    ++ + E+  EN + + E +  EFPTTN+YELE RV T++WSIPYK+ ESL KCL  +  LA    +E+D++C RF+DR   E FKKLLTS AV KW  +IHEG++NM+ L I+ +AER+K  P P  LLG L++AF+PD+E+HFKNR  K ++ ++ ++FG     AVSP     K P GW+VDL+N+F + GG  +I   + + D +    +++L++P G CA YLN+ V    L  +    +Q V  +E  D+KDK +  + +LL +++ +C     D  + + +L L  +L+ML+ P F+ +MN+LKE+++LI+D+  ++     I  D +  WL++N VLSIA   ++  AQY ++++ I++   SK+SL+ELT IW +Q G+  TV++NIH+II++A   F+ +Q+ H   L++KSW+ E D+ +++LL L+G++GRE +      ++LD+LW  +HL   LP  LI QA++ H+ +L D+  +  A K  Y+ KC++DIK                     NN    WVVP +R +     S  K+   K  +  IQD+++N +++KL+T SL   H+ A +   PG LSG T+++  Y Y E +  HLK + F L++  LYL + RAKEIW+CL+  ++ C+ D E C EWF +   DL++D  ++LF +K+LK +   +   G   F  +FE VN  +HR+ R G+ L V+K ELIGM ++W++ ++SP   IA EA Q +I+ S+  L+ +LKK DS S+HKKF+ +C  RLE   S L       P     +TR  K       P   +S++   RS   + IERLL L   Y+IT+ED Y++PR    HG+ +HG+ + +++T ES K    V +HSNE + +VR KIA +L  PV+ +QI  ND  L  +KD KLL QL F  +Q LT K   +   +   A  +  S+S+SS   + S +    M++EK LPG ++A+   +FD LY LA LEEP+IT  +R LL  +PTD  + +A+D               S Q+    S  ++  +  S++S+LE+ F+  AP MSTFRVLYNL+VLSSKLMP    D A +  +SF EN+L AGGL L++N++  D++PS  DYE RQ  Y I LQLARFLL G
Sbjct:    1 MESE-EEQHMTTLLCMGFSDPATIRKALRLAKNDINEAVALLTNERPGLDYGGYEPMDSGGGPSPGPGGGPRGDGGGDGGGGGPSRGGSTGGGGGFDPPPAYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPTGLLGVLTMAFNPDNEYHFKNRM-KVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVVQPMLDPVILTTIQDVRSVEEKDLKDKRLVSIPELLSAVKLLCMRFQPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTLSKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLP-TLPSSLIQQALEEHLTILSDAYAVKEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQFVWVVPALRQLHEITRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKK-DSVSLHKKFIADCYTRLEAASSALG-----GPTLTHAVTRATKMLTATAMPTVATSVQSPYRSTKLVIIERLLLLAERYVITIEDFYSVPRTILPHGASFHGHLLTLNVTYESTKDTFTVEAHSNETIGSVRWKIAKQLCSPVDNIQIFTNDSLLTVNKDQKLLHQLGFSDEQILTVKTSGSGTPSGSSADSSTSSSSSSSGVFSSSYA----MEQEKSLPGVVMALVCNVFDMLYQLANLEEPRITLRVRKLLLLIPTDPAIQEALDQLDSLGRKKTLLSESSSQSSKSPSLSSKQQHQPSASSILESLFRSFAPGMSTFRVLYNLEVLSSKLMPTADDDMARSCAKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVG 1249          

HSP 2 Score: 394.815 bits (1013), Expect = 4.888e-111
Identity = 222/577 (38.47%), Postives = 335/577 (58.06%), Query Frame = 0
Query: 1312 TPDGNLRKRL----RSTSSVLESVSPTVKMVIENINEEEFKEIISSLLQVSWSAAAGQLQLNTKQNSTTPVASSSG---EAYSNPFTHSKQQTSSNSSMLHYQLKAGLCLSQETVSIMDSVLANNSLELLVMCLQLRPNLMDLFYKLPNVDDFIVDVLTGSPSFEVRAAASLHFSVLSMTLNNTMD--THPKAFLIKTLLKAHLPVWNISGTIRGHAYKILTQCEQYFELLSNLLCQLSLSAQTEYNINPSQLLEGELNFLQN-------------SDNLNVEMLTGHLSFSSALFTCEGIDKTTQGCRFLTYLLNEFLFSASKL---EHANTSLSTFSVLDINIHSFNSQCRQQAFNLLLTTADRCPGNIASIADELTRRHH--NQVISKEWAFQPAISARPANGFVGLSNAGATCYMNSILQQLYMQPGIREALLKVEDQQSTTKDTILSQVQNIFGHLLESQTQFFKPEGFWKTFKLWGEPVNLREQQDALEFYTNITDQLDEHLKTLKKEEIFKKAFSGTFVDQKTCSDCSHCFERDEPFSSLPVTVKS-GNLEASLEQFVHTEVMEGENAYY 1860
            TP+ +  ++L    RS+  V E + P  ++ I+ +   +F   ++  +++SW+AAAG+L L     S+ P+  S+        N  + S    SS S      L AG+C+ Q++VS  DS++A  +L LLV CLQLR   +  FY LP V DFI+D+L GSPS E+R  A      LS T  +       P  FL+  +L A LP+W+ +  +RG   ++L+QC +YF+L   LL  L+ S   +  I+P+ +LE E+ +L N             +DN+   +L GHL     L +  G +K   G   +  LL++FLF AS++    H+    +  S  D +     +  R  A+ +L+  AD  P N+  I  EL   HH  +  ++KE+ + P + +R ++GFVGL N GATCYMN++ QQLYMQPG+ E+LL V+D      D++  QVQ++FGHL+ES+ Q++ PE FWK FK+W + + +REQQDA EF+T++ DQ+DE+LK + +++IFK  F G + DQK C DC H +ER+E F +L + V S  +LE SL+QFV  EV+EG NAYY
Sbjct: 1289 TPEKSSYRQLSVSDRSSIRV-EEIIPAARVAIQTMEVSDFTSTVACFMRLSWAAAAGRLDL---VGSSQPIKESNSLCPAGIRNRLSSSGSNCSSGSEGEPVALHAGICVRQQSVSTKDSLIAGEALSLLVTCLQLRSQQLASFYNLPCVADFIIDILLGSPSAEIRRVACDQLYTLSQTDTSAHPDVQKPNQFLLGVILTAQLPLWSPTSIMRGVNQRLLSQCMEYFDLRCQLLDDLTTSEMEQLRISPATMLEDEITWLDNFEPNRTAECETSEADNI---LLAGHLRLIKTLLSLCGAEKEMLGSSLIKPLLDDFLFRASRIILNSHSPAGSAAISQQDFHPKCSTANSRLAAYEVLVMLADSSPSNLQIIIKELLSMHHQPDPALTKEFDYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDDSVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGRDQIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAYY 1858          
The following BLAST results are available for this feature:
BLAST of TCONS_00009985-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP244.888e-11139.21Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo s... [more]
back to top