TCONS_00009948-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009948-protein
Unique NameTCONS_00009948-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009948-protein ID=TCONS_00009948-protein|Name=TCONS_00009948-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
AKVKRKSEAALTIIDRIITKCELSNEVNFFNVKNNHALILKDLHRFTDAI
KILEEKLSPSKVDTKITQYVLVVKTNLASFYREIGNHKKSLEMHEEVYKK
KSELYGEYDKSTLITMGNLMNDYSDVGDHENAISLGERVLQSKNQVFGEN
NETTLMTKFNLASXKIDLDSALHQLESASIINKRNTDNGIIVTIHSLIQA
TVLTLSKTNEIGYLIKCLKAFFKEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005578XLOC_005578Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009948TCONS_00009948Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011991WHTH_DNA-bd_dom
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 97..179
e-value: 1.7E-14
score: 53.4
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 3..96
e-value: 2.2E-4
score: 20.6
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 26..142
NoneNo IPR availablePFAMPF13424TPR_12coord: 72..142
e-value: 3.0E-10
score: 40.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009948-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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