TCONS_00009796-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009796-protein
Unique NameTCONS_00009796-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1031

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009796-protein ID=TCONS_00009796-protein|Name=TCONS_00009796-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1031bp
MTTPIIGEGEKLITTVLLNGERLHVRVHAHACGQNVFNAIVQHIGLNEIT
YFGLMIIKEGEQQFLDLDDKLNRLAKYAPHLWKDDESCNSSLVFTIFFRV
KYYVENICLLQEQQTRHQYYLQLRKDVLENSIRVHDDTSMILASYALQTE
LGDYDRNIHGLDYFVPQLYLPAKTIAKLTIPYIKNALPAMHQSHRGLSEA
QAEIEFLKEAQKLSEYGVLFNRVYKKEYNKKVPYNLGICVRGLVIYEETG
PVRNPVCKHPWAKVKKMSFKRSKFIVESECTNPAFAKLMFYTTNYKRSRY
LLRMSSSFFNFQMMMASRLAMLPEHLQQEEQYAPPVIPTMQQATPSQVAP
QRLDSARSRQLDTTDSASPLIMGVNGDQAGKKGSITNGTTGTGSTQNGSV
VKETPKAKPKPKPEAKQYTLDLVKKEGSFGFSIVGGIELGGIFVKDVTLG
GPASQSGLIKAGDRIVQINKDSFENVTRREAINTLRAAPDKSRFIMETFG
QNLVFEADVSILTPLAVSAQSLAIHQPQIPVQQTDRESEFIRVDLPRKDN
SYGIGFTGGPEFGGVYVKSILQNGSAELDGRVAIGDRIIEVNQTNVETFS
RKKILELLKQTTGNCTLVLERFKQIPAAGGGTIYIDREKVLRSNQNFISI
TLNKKNDSLGFSITGGLDLGGIFVKYINPNGPAAMDGRLEVGDRIVAVND
ISLETTTRQNALDIIRRSTSPVILMAEKYLAPNVMANGDPGHSIMRSDSI
KSLPTSRQKSAMHGINLSMQHIPNTEHHGIIEGTNNPHGGSLLPPGGDPY
QPQLPGGAPPPPDGGNRRSIQDVFVVDLTKINGSFGISLTGGVEVGGIYV
KAVLPGGAADLDRRIRKGDRVLEINARRMDGLSRSDAIDWFKSCDRAALV
VERIVEVSSSSNQHKMLQPGSQSQLSSFEGDCYTVELQRKGKTFGLCLFG
GPEQHGIFVKSLMPDGPALQSSRIVPGDRVHDINGVSLDSLTTAVKAIEV
LKQSPDNVTLIMERLHSPQEVPPLDLVCYTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005483XLOC_005483Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009796TCONS_00009796Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019749Band_41_domain
IPR018980FERM_PH-like_C
IPR001478PDZ
IPR019748FERM_central
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR011993PH_dom-like
IPR018979FERM_N
IPR000299FERM_domain
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019749Band 4.1 domainPRINTSPR00935BAND41coord: 121..134
score: 37.05
coord: 134..154
score: 45.73
coord: 201..217
score: 49.14
coord: 44..56
score: 50.96
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 7..221
e-value: 8.9E-41
score: 151.5
IPR018980FERM, C-terminal PH-like domainSMARTSM01196FERM_C_3coord: 228..320
e-value: 8.6E-22
score: 88.4
IPR018980FERM, C-terminal PH-like domainPFAMPF09380FERM_Ccoord: 230..317
e-value: 3.7E-14
score: 52.8
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 833..905
e-value: 3.3E-13
score: 59.9
coord: 657..730
e-value: 6.5E-18
score: 75.5
coord: 427..502
e-value: 3.0E-15
score: 66.7
coord: 942..1016
e-value: 4.1E-11
score: 52.9
coord: 550..623
e-value: 3.7E-16
score: 69.7
IPR001478PDZ domainPFAMPF00595PDZcoord: 543..619
e-value: 2.6E-12
score: 46.8
coord: 935..1011
e-value: 5.3E-10
score: 39.4
coord: 650..724
e-value: 1.5E-13
score: 50.8
coord: 421..489
e-value: 1.9E-14
score: 53.6
coord: 827..894
e-value: 9.6E-11
score: 41.8
IPR001478PDZ domainPROSITEPS50106PDZcoord: 649..730
score: 20.405
IPR001478PDZ domainPROSITEPS50106PDZcoord: 419..500
score: 18.536
IPR001478PDZ domainPROSITEPS50106PDZcoord: 542..623
score: 17.652
IPR001478PDZ domainPROSITEPS50106PDZcoord: 825..893
score: 16.325
IPR001478PDZ domainPROSITEPS50106PDZcoord: 934..1016
score: 17.39
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 917..1014
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 648..725
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 531..624
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 823..900
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 414..497
NoneNo IPR availableGENE3D2.30.42.10coord: 916..1022
e-value: 8.9E-18
score: 63.9
NoneNo IPR availableGENE3D2.30.42.10coord: 820..915
e-value: 8.3E-17
score: 60.6
NoneNo IPR availableGENE3D3.10.20.90coord: 12..101
e-value: 6.0E-12
score: 44.9
NoneNo IPR availableGENE3D2.30.42.10coord: 388..502
e-value: 8.5E-21
score: 73.7
NoneNo IPR availableGENE3D2.30.42.10coord: 523..625
e-value: 8.3E-17
score: 60.6
coord: 632..729
e-value: 3.5E-20
score: 71.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 780..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..415
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 823..902
e-value: 2.40527E-14
score: 69.1326
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 648..725
e-value: 4.82394E-18
score: 79.9182
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 418..497
e-value: 3.95386E-15
score: 71.4438
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 933..1013
e-value: 5.22442E-13
score: 65.2806
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 547..620
e-value: 7.64318E-13
score: 64.8954
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 110..219
e-value: 2.2E-22
score: 79.6
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 115..213
e-value: 1.65626E-28
score: 110.414
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 105..213
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 102..214
e-value: 4.0E-24
score: 84.5
IPR011993PH domain-likeGENE3D2.30.29.30coord: 216..317
e-value: 2.3E-12
score: 46.7
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 215..322
IPR018979FERM, N-terminalPFAMPF09379FERM_Ncoord: 16..75
e-value: 6.5E-10
score: 38.7
IPR000299FERM domainPROSITEPS50057FERM_3coord: 11..316
score: 62.971
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 13..105

Blast
BLAST of TCONS_00009796-protein vs. Swiss-Prot (Human)
Match: FRPD2 (FERM and PDZ domain-containing protein 2 OS=Homo sapiens GN=FRMPD2 PE=1 SV=3)

HSP 1 Score: 250.366 bits (638), Expect = 2.290e-68
Identity = 229/836 (27.39%), Postives = 354/836 (42.34%), Query Frame = 0
Query:   13 ITTVLLNGERLHVRVHAHACGQNVFNAIVQHIGLNEITYFGLMIIKEGEQQFLDLDDKLNRLAKYAPHLWKDDESCNSSLVFTIFFRVKYYVENICLLQEQQTRHQYYLQLRKDVLENSIRVHDDTSMILASYALQTELGDYDR-NIHGLDYFVPQLYLPAKTIAKLTIPYIKNALPAMHQSHRGLSEAQAEIEFLKEAQKLSEYGVLFNRVYKKEYNKKVPYNLGICVRGLVIYEETGPVRNPVCKHPWAKVKKMSFKRSKFIVESECTNPAFAKLMFYTTNYKRSRYLLRMSSSFFNFQMMMASRLAMLPEH-LQQEEQYA--PPVIPTMQQATPSQVAPQRLDSARSRQ-LDTTDSASPLIMGVNGDQAGKKGSITNGTTGTG-------------------------------STQNGSVVKETPKAKPKPKPEAKQYTLDLVKKEGSFGFSIVGGIELG----GIFVKDVTLGGPASQSGLIKAGDRIVQINKDSFENVTRREAINTLRAAPDKSRFIME----------------------------TFG------------------------QNLV--FEADVSILTPLAVSAQSLAIHQPQIPVQQTDRESEFIRVDLPRKDNSYGIGFTGGPE----FGGVYVKSILQNGSAELDGRVAIGDRIIEVNQTNVETFSRKKILELLKQTTGNCTLVLER-----FKQIPAA----GGGTIYIDREKVLRSN-QNFISIT--------LNKKNDSLGFSI-------TGGLDLGGIFVKYINPNGPAAMDGRLEVGDRIVAVNDISLETTTRQNALDIIRRSTSPVILM 725
            +  VLLNG+ L V+    +    VFNA+     L E+TYFGL  +K  E  FLD +    RL K AP  W++     S   FT+F R+K++V +  LLQ   TRHQ+YLQLRKD+LE  +  +++  + L   ALQ E G+Y +  +    YF  + Y+PA  I ++T   ++  +  MH+    L    AE++FL+  Q+L EYGVL ++V+ ++   +    LGIC +G+++YE     R  + +  W +  K+S  + KF + S  T     K  F T + K S+YLL + S+   F   M S     P H L   +++     + P  Q  +   +  QRL  + +   +     A+  ++  + D     GS   G  G G                               S   GS          +P  E  + TL      G FGF I  G   G    GIF+  +  GGPA ++  IK G +I+ +N  S E  T   A+  ++ +PD    I+                             +FG                        Q+LV      +S L PL  +  S     P+I         E   V+L ++D + G   TGG      +GG+YVKSI+  G A  +G++  GDR+++V+   +   + K+ ++ L        LVLER      +Q P+A    G     +     L     + +S+T        L K  + LGFS           L    + +K + P  PA  +G +  GD I+AVN  S E    Q  L ++R +   V L+
Sbjct:  344 LCVVLLNGQHLEVKCDVESTVGAVFNAVTSFANLEELTYFGLAYMKSKEFFFLDSE---TRLCKIAPEGWREQPQKTSMNTFTLFLRIKFFVSHYGLLQHSLTRHQFYLQLRKDILEERLYCNEEILLQLGVLALQAEFGNYPKEQVESKPYFHVEDYIPASLIERMTALRVQVEVSEMHRLSSALWGEDAELKFLRVTQQLPEYGVLVHQVFSEKRRPEEEMALGICAKGVIVYEVKNNSRIAMLRFQWRETGKISTYQKKFTITSSVTG---KKHTFVTDSAKTSKYLLDLCSAQHGFNAQMGSG---QPSHVLFDHDKFVQMANLSPAHQARSKPLIWIQRLSCSENELFVSRLQGAAGGLLSTSMDNFNVDGSKEAGAEGIGRSPCTGREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSFIAEPGREIVRVTLKRDPHRG-FGFVINEGEYSGQADPGIFISSIIPGGPAEKAKTIKPGGQILALNHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNPDEEKNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVPRLRHQLSFL-PLKGAGSSCPPSPPEISA------GEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVPGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLTGPGQVARLVLERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDGPKFEVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQEVLHLLRGAPQEVTLL 1162          

HSP 2 Score: 94.3597 bits (233), Expect = 1.918e-19
Identity = 110/427 (25.76%), Postives = 184/427 (43.09%), Query Frame = 0
Query:  645 QNFISITLNKK-NDSLGFSITGGLDLG----GIFVKYINPNGPAAMDGRLEVGDRIVAVNDISLETTTRQNALDIIRRSTSPVILMAEKYLA-----PNVMANGDPGHSIMRSDSIK-----SLPTSRQKSAMHGINLSM----QHIPNTEHHGIIEGTNNPHGGSLLPPGGDPYQPQLPGGAPPPPDGGNRRSIQDVFVVDLTKINGSFGISLTGGVEV----GGIYVKAVLPGGAADLDRRIRKGDRVLEINARRMDGLSRSDAIDWFKSCDRAA-LVVERIVEVSS----SSNQHK----------MLQPGSQSQLSSF-EGDCYTVELQRKGKTFGLCLFGGPEQHG-------IFVKSLMPDGPALQSSRIVPGDRVHDINGVSLDSLTTAVKAIEVLKQSPDNVTLIMERLHSPQEVPPLD 1025
            +  + +TL +  +   GF I  G   G    GIF+  I P GPA     ++ G +I+A+N ISLE  T   A+ +I+ S   + L+  +        P+   N      +  +D +      SL +  Q    +   L M      +P   H   +        GS  PP            +PP    G      +++ V+L K +G+ G S+TGG+      GGIYVK+++PGG A  + +I +GDR+L+++   + GL+   A+       + A LV+ER V  S+    S+N                PG  S   S  +G  + V+L++     G       ++         + +K L P  PA ++  I  GD +  +NG S + L    + + +L+ +P  VTL++ R   P  +P L+
Sbjct:  771 REIVRVTLKRDPHRGFGFVINEGEYSGQADPGIFISSIIPGGPAEKAKTIKPGGQILALNHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNPDEEKNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVPRLRHQ--LSFLPLKGAGSSCPP------------SPPEISAG------EIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVPGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLTGPGQVARLVLERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDGPKFEVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQ-EVLHLLRGAPQEVTLLLCR-PPPGALPELE 1175          
The following BLAST results are available for this feature:
BLAST of TCONS_00009796-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FRPD22.290e-6827.39FERM and PDZ domain-containing protein 2 OS=Homo s... [more]
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