TCONS_00009700-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009700-protein
Unique NameTCONS_00009700-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length567

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009700-protein ID=TCONS_00009700-protein|Name=TCONS_00009700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=567bp
MEQAYGFIRFLEAEAKTLGKQSSEEVLTCLKDLLTSNHQNDWMSMSLLCS
TLKFCDLEVYEEHALLWFKFTLKLLNSIPSESLVGLCLENLNGIVTKSVL
AEKISREFSTKGLEPLLQLLTGPSLPPHVNTLHLLTTCMKLYSGTCGRQR
KKIENLLLSFIPSIDNQISITASHAFSLLPQIGSGGEKHFKHKENWQEYV
TKLLKSICVFSTDLMNANNENQTNKMDEIFVLPFPKYEGSVINSGLLCLL
RIEKLLQMLNGLLKRSTSFVVHIPLSIIVHTFCEVINLLDIDFEKRSDLQ
IEKSTVSITLDGLLSNLMTCFGTCCKQFSLCFAPYTDLISKSILRVLSHP
GFKYKSQCYETFQHCIRHCFLSFTNCTSFADILDCVLNDIKLEMNNAPKL
KQETQHTKKKKKNQQAKAFSRDIDQISSNNQQIGVSTRSIKNTESAYRTL
SMVVTEAGHTLSSDMMQKIISALLIIHSKLSENPFHQIGQYTDKIKLNYL
ETLSSLLHLHHNMVQIPTSIILSIFRMNAFIGSQCSEIKSYCQHVLLNFD
QVLHSATPELRXVNKSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005425XLOC_005425Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009700TCONS_00009700Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR012583RIX1_N
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 7..561
e-value: 1.2E-9
score: 36.4
IPR012583Pre-rRNA-processing protein RIX1, N-terminalPFAMPF08167RIX1coord: 22..162
e-value: 1.3E-9
score: 38.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 440..549
coord: 254..394
coord: 20..220

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009700-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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