TCONS_00009615-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009615-protein
Unique NameTCONS_00009615-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length804

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009615-protein ID=TCONS_00009615-protein|Name=TCONS_00009615-protein|organism=Clytia hemisphaerica|type=polypeptide|length=804bp
MGGSSDLDEAILTALLNTTEPERQLNLTLLWDRADLAENKILSQIGRRWT
DDQLHYAMLMALAEDRVDFVRLFLSYGVSVPKVVDQKTLEFLYAYRSEQS
TLRFDRRSTNASFTEVTNPLVKRFCQENDVDLRIITMDRILMFIDELTSD
MRHGTPMLSSDVSVENDPYLHLFLWAVLNGQHQMALYLWEFGEEGLAKSL
VAIEINGKLAAKAEKISNLPDEVASDLKDYSAEFRTLSHDLLDKCYRDCE
SKTLKLITEQSEQFNKRTSIDMAVSMMHLEFVSHSCVQALLNDVWTGYIK
DSDITTRDFLLTMLFPPYLTTFDFRTENEMKDMIQMAEDEDSGPPTIQAI
TMGLPLASKTKNEENENEQELEPDSNGSSMKLVQSKGPQKSYQSTQDTSS
PSYSNQDETLSAQRDKELSFCGKMYLFYAKTPAVKFYLNLVSYIVFLCIY
AYVAIKEKVPGSTPSVTEYIVLAFVVSFTTEEIHQLVQTEYSTFRAKILD
YLSSYWNLVDIVAIITYFTGFALRCFSSTTHVGHLILALNAGIWILRLLH
VFYVHRIMGPYVVMIYRMFIDMMYFLTILFVFMVAYGVCSTAILVPQKAS
WKMFIDVIFHPYYNIYGELFIDRDPEGSQTTRFGTDVINSYAEPISWVML
ALYLLIANVLLLNLLIAIFGDTFSSVQENSAQIWKYQRYGLILEYAARPA
LIPPFTLFVHIYLFVRWIWDCCCCKKHDEEGVVGLTTKLDEYEKEEMNEF
ESDSVASYVRSVRSQANDNTTENESVQELLERVKHLTKICTTMEGRLKAC
EDKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005368XLOC_005368Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009615TCONS_00009615Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 437..680
e-value: 5.7E-18
score: 64.9
NoneNo IPR availableGENE3D1.20.120.350coord: 633..701
e-value: 0.0076
score: 15.0
coord: 319..559
e-value: 1.7E-8
score: 33.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..408

Blast
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BLAST of TCONS_00009615-protein vs. Swiss-Prot (Human)
Match: TRPM3 (Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4)

HSP 1 Score: 363.614 bits (932), Expect = 4.142e-108
Identity = 255/841 (30.32%), Postives = 440/841 (52.32%), Query Frame = 0 
Query:    3 GSSDLDEAILTALL---NTTEPERQLNLTLLWDRADLAENKILSQIGRRWTDDQLHYAMLMALAEDRVDFVRLFLSYGVSVPKVVDQKTLEFLYAYRS-------------EQSTLRFDRRSTNASFTEVTNPLVKRFCQENDVDLRIITMD------------RILMFIDELTSDMRHG---TPMLSSDVSVEND---------PYLHLFLWAVLNGQHQMALYLWEFGEEGLAKSLVAIEINGKLAAKAEKISNLPDEVASDLKDYSAEFRTLSHDLLDKCYRDCESKTLKLITEQSEQFNKRTSIDMAVSMMHLEFVSHSCVQALLNDVWTGYIKDSDITTRDFLLTMLFPPYLTTFDFRTENEMKDMIQMAEDEDSGPPTIQAITMGLPLASKTKNEENENEQELEPDSNGSSMKLVQSKGPQKSYQSTQDTSSPSYSNQDETLSAQRDKELSFCGKMYLFYAKTPAVKFYLNLVSYIVFLCIYAYVAIKEKVPGSTPSVTEYIVLAFVVSFTTEEIHQLVQTEYSTFRAKILDYLSSYWNLVDIVAIITYFTGFALRC----FSSTTHVGHLILALNAGIWILRLLHVFYVHRIMGPYVVMIYRMFIDMMYFLTILFVFMVAYGVCSTAILVP-QKASWKMFIDVIFHPYYNIYGELFIDR--DPEGSQTTRFGTDVIN-SYAEPISWV---MLALYLLIANVLLLNLLIAIFGDTFSSVQENSAQIWKYQRYGLILEYAARPALIPPFTLFVHIYLFVRWIWDCCCCKKHD---EEGVVGLTTKLDEYEKEEMNEFESDSVASYVRSVRSQAND--NTTENESVQELLERVKHLT 787
            G  D+D AILTALL   N + P+ QL+L L W+R D+A ++I    G++W    L  AML AL  DRVDFV+L +  GVS+ + +    LE LY  R              ++  L  D R +      V   L+    + N    R  T+             ++L   D++   +R G   T     +V ++ D         P+  L +WAVL  + +MAL+ W+ GEE +AK+LVA ++   +A +A + +++ D+++ +L   S +F  L+ +LLD+ Y+  E   +KL+T + + ++  T + +AV+  H +F++H+C Q LL D+W G ++    +    +L +L PP + + +F+ +++M  M Q  E        I           K   E+ E + EL       +  L ++ G              S   +DE     + + +    K+Y FY   P VKF+   ++YI +L ++ Y+ + +      PS  E+IV++++ +   E++ +++ +E      K+  +L  YWN+ D++AI+ +  G  LR     F S    G +I  +N   W +RLL +F V++ +GPYV+MI +M IDMMYF+ I+ V ++++GV   AIL P ++ SWK+  ++ + PY+ IYGE+F D+   P G   TR    +I     +  +W+   ++A YLL+AN+LL+NLLIA+F +TF  V+  S Q+WK+QRY LI+ +  RP L PP  +F H+ +  + +  CC  +KH+   +E   GL   + + E +++++FE   +  Y R    + +D  N++ +E ++   ERV++++
Sbjct:  459 GHQDIDLAILTALLKGANASAPD-QLSLALAWNRVDIARSQIFI-YGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIP--LRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASE-NDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPYMSQAQE--------IHLQEKEAEEPEKPTKEKEEEDMEL-------TAMLGRNNG-------------ESSRKKDEEEVQSKHRLIPLGRKIYEFY-NAPIVKFWFYTLAYIGYLMLFNYIVLVKM--ERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQDQPFRSD---GRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDPPCGQNETREDGKIIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHL--CCRWRKHESDPDERDYGLKLFITDDELKKVHDFEEQCIEEYFR----EKDDRFNSSNDERIRVTSERVENMS 1254
The following BLAST results are available for this feature:
BLAST of TCONS_00009615-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRPM34.142e-10830.32Transient receptor potential cation channel subfam... [more]
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