TCONS_00009591-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009591-protein
Unique NameTCONS_00009591-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length258

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009591-protein ID=TCONS_00009591-protein|Name=TCONS_00009591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MGKKTPKVKNVAEQRKYKERYQILRRQVKHQVFMNAALSDEVTHMESQFM
LLKNERKFLLKKLFKHLPMTESQCLESTKALNALESSHPGQIPHSILSSV
QPTVSPAKKGNNAVSESPATSSKKHQQQQDPSSANKPKRKKPGSVKKKVQ
PLHMNDENVPFFPITIGTLTVHDLGEILSDKAGFHSERYLWPVGFCSTRL
YPSMVDPDRKILYFCYIKDGGNEPLIMLQNTGEXTFQKKLHNIKENRRFK
QCYSSVAP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005356XLOC_005356Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009591TCONS_00009591Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003888FYrich_N
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003888FY-rich, N-terminalSMARTSM00541fyrn_3coord: 176..219
e-value: 3.4E-13
score: 59.8
IPR003888FY-rich, N-terminalPFAMPF05964FYRNcoord: 167..217
e-value: 1.5E-21
score: 75.9
IPR003888FY-rich, N-terminalPROSITEPS51542FYRNcoord: 161..220
score: 30.555

Blast
[Close]
BLAST of TCONS_00009591-protein vs. Swiss-Prot (Human)
Match: TBRG1 (Transforming growth factor beta regulator 1 OS=Homo sapiens GN=TBRG1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 8.136e-35
Identity = 90/234 (38.46%), Postives = 132/234 (56.41%), Query Frame = 0 
Query:    3 KKTPKVKNVAEQRKYKERYQILRRQVKHQVFMNAALSDEVTHMESQFMLLKNERKFLLKKLFKHLPMTESQCLESTKALNALESSHPGQIP--HSILSSVQPTVSPAK--KGNNAVSESPATSSKKHQQQQDPSSANK--------PKRKKPGSVKKKVQPLHMNDENVPFFPITIGTLTVHDLGEILSDKAGFHSERYLWPVGFCSTRLYPSMVDPDRKILYFCYIKDGGNEP 224
            KK PK    ++  KY+ +Y  LR+  K  VF NAA+ DE+  +E +F+  K ER++LLKKL +   +TE +       + A   SH   +P  + + SSV  T+  A    G +  +E P     K ++++     NK         K+K  G  +K VQP+ ++    P FPI +G LTV+ LGEI++D+ GFH E  ++PVG+CSTR+Y SM  PD+K LY C IKDGG +P
Sbjct:   23 KKLPKK---SQNEKYRLKYLRLRKAAKATVFENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGE-------VQAAAPSHSSSLPLTYGVASSVG-TIQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARKLVQPIALDPSGRPVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQP 245
The following BLAST results are available for this feature:
BLAST of TCONS_00009591-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBRG18.136e-3538.46Transforming growth factor beta regulator 1 OS=Hom... [more]
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