TCONS_00009506-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009506-protein
Unique NameTCONS_00009506-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length466

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009506-protein ID=TCONS_00009506-protein|Name=TCONS_00009506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
GSNRAVMLCEGNLRDMILFMLLLADLHFAGTFAVNNGMTKGIQKKPGFAF
AHSTIRTTLKLKECPFNKTIMYSNKNKSLPVTRTCSDRDNNPYMELFWDK
PDGVSALETIYYIVRLNIPPSNFCFGFNVSMATKLKFTAQDGFIENKSYW
VSIDAFTENRKSQILSKIIKLGSCPWIGEWANWGTWSSCPTGICPSGNRQ
PPKTTRTRYCMLKNNNETYLESRDCKGYRTDSKNCGLMKCTTDVSSKDQV
INGRTVTITTQIGIAFGVLTLSIILIVVFYRTIKNRQEFKLVTEPNRVTE
HSTVYISHLTIDETQERSLLNLVHFISTYGIRPKLDILCQVEINDAGGLH
NWIPDVLTKIDTVILLITKKYIEALTSIKENDLKLNEQVCKIHTEFNLIK
KRLYQSKQQNPKLVILLDDKIKTEMLPKDLSGRTFCFLPKRYDQKDDERC
NKLLGHLLNVEPIQIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005309XLOC_005309Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009506TCONS_00009506Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR000157TIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 177..240
e-value: 1.1E-4
score: 21.9
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 176..241
score: 8.149
IPR000157Toll/interleukin-1 receptor homology (TIR) domainGENE3D3.40.50.10140coord: 293..460
e-value: 1.5E-4
score: 21.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009506-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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