TCONS_00009440-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009440-protein
Unique Name	TCONS_00009440-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	860

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009440-protein ID=TCONS_00009440-protein|Name=TCONS_00009440-protein|organism=Clytia hemisphaerica|type=polypeptide|length=860bp
MVRKTQTAWLLLVAVILSCASYALAAGGNGTGIVIFKAEFHHVAKPFVVC
AWVLAASIAKIIFHHFEKLSSIVPESCLLILLGVPIGFILEAAGVTSEAE
NTILTTDLFFFYLLPPIILDAGYFMPTHTFVANIGTILLYAVFGTIFNTF
AVGLALWGISGVAGFDISLLQGLLFGSLISAVDPVAVLAVFEEVHVHEIL
YMLVFGESVLNDAASVVLYRTFESLIAGTVNAEQIGLAFASFLVVSLGGT
LIGIIFGLLTSFITKFTEHVRVIEPVFVFLMAYMSYLTAEIFHFSGIISI
LFCGIVMKPYVESNMSRKSHTTVKYFLKLLSSSADSIIFMFLGVSLVQYN
HHFNYEFIVFTLIFITLFRAIGVAMLTFIANKFGRLEKVKKVEQFIMSYG
GLRGAVAFSLAILIKSPDKMFTRTIVTTTITVVMFTTFIQGTTIKKLVDF
LGVRRSEKRVKSMAEALNDRTLGYMVAGIEEIIGVHGHGFFGDVFELFNK
KVLRPLLERDPDNPLDDQLLAHQRKIAFKYALDYASNPSSLFAKESDANM
LNHITNNPSVAMHLALKAQDESQCTGDYCGVLDINALSERYNCPEDEQEQ
EETNHHSSDAFSHRKISSIIPKANRQYTKTYSNRRYTLNSLDEDVPIEDQ
VRRNRGKPQLAPHHSRPLGHPTHHHHGHGHHHHKKKGHSHKHHHGHHHSH
SSKNKHHHHHSNIQEEDDGMEDAIINGNSSMIPLHEVESSASTRSDDTPP
QDSEDEQGGGDLDDVDGEDDDDQGLVMHFSTNKNTIPPTIGFVPSLPIDQ
DESPQLSRHNVTQRDTLEVKNASKWRSYTLDSVDGSSQVIANRDAVLDIP
AIIEDDSTDQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005292	XLOC_005292	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009440	TCONS_00009440	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004709	NaH_exchanger
IPR006153	Cation/H_exchanger

Vocabulary: **Biological Process**
Term	Definition
GO:0006885	regulation of pH
GO:0006814	sodium ion transport
GO:0055085	transmembrane transport
GO:0006812	cation transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015385	sodium:proton antiporter activity
GO:0015299	solute:proton antiporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0006885	regulation of pH
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015385	sodium:proton antiporter activity
molecular_function	GO:0015299	solute:proton antiporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004709	Na+/H+ exchanger	PRINTS	PR01084	NAHEXCHNGR	coord: 108..119 score: 73.03 coord: 176..186 score: 78.52 coord: 122..136 score: 45.93 coord: 137..145 score: 67.31
IPR004709	Na+/H+ exchanger	TIGRFAM	TIGR00840	TIGR00840	coord: 40..632 e-value: 1.1E-177 score: 589.8
IPR006153	Cation/H+ exchanger	PFAM	PF00999	Na_H_Exchanger	coord: 50..447 e-value: 7.2E-75 score: 252.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 653..715
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 737..782
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..617
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..19 score: 6.0

Blast

[Close]

BLAST of TCONS_00009440-protein vs. Swiss-Prot (Human)
Match: SL9A2 (Sodium/hydrogen exchanger 2 OS=Homo sapiens GN=SLC9A2 PE=2 SV=1)

HSP 1 Score: 481.871 bits (1239), Expect = 4.745e-158
Identity = 249/507 (49.11%), Postives = 353/507 (69.63%), Query Frame = 0

Query:   35 IFKAEFHHVAKPFVVCAWVLAASIAKIIFHHFEKLSSIVPESCLLILLGVPIGFILEAAGVTSEAENTILTTDLFFFYLLPPIILDAGYFMPTHTFVANIGTILLYAVFGTIFNTFAVGLALWGISGVAGF---DISLLQGLLFGSLISAVDPVAVLAVFEEVHVHEILYMLVFGESVLNDAASVVLYRTFESLIA-GTVNAEQIGLAFASFLVVSLGGTLIGIIFGLLTSFITKFTEHVRVIEPVFVFLMAYMSYLTAEIFHFSGIISILFCGIVMKPYVESNMSRKSHTTVKYFLKLLSSSADSIIFMFLGVSLVQYNHHFNYEFIVFTLIFITLFRAIGVAMLTFIANKFGRLEKVKKVEQFIMSYGGLRGAVAFSLAILIKSPDKMFTRT--IVTTTITVVMFTTFIQGTTIKKLVDFLGVRRSEKRVKSMAEALNDRTLGYMVAGIEEIIGVHGHGFFGDVFELFNKKVLRPLLERDPDNPLDDQLLAHQRKIAFKYALDYA 535
            +F  ++ HV  PF +  W+L AS+AKI FH + KL +IVPESCLLI++G+ +G I+   GV  E     + TD+FF YLLPPI+LDAGYFMPT  F  NIGTI  YAV GT++N+  +G++L+GI  +  F   DI+LLQ LLFGSLISAVDPVAVLAVFE +HV+E LY+LVFGES+LNDA +VVLY  F+S     T+    +    A+F VV +GG LIGI  G + +F T+FT ++RVIEP+FVFL +Y+SY+TAE+FH SGI++I  C + M  YVE N+S+KS+TT+KYF+K+LSS ++++IF+F+GVS V  NH +N+ F+ FTL F  ++RA+GV +LT + N+F  +    K +QFI++YGGLRGA+ F+L  L+  P  +F R    +T  I V+ FT FI G TI+ LV+FL V+RS K+ ++++E +  R   ++  GIE++ G  GH F+ D F+ F+ K LR LL R  +N     +++  +K+  K+A++ A
Sbjct:   70 VFTLDYPHVQIPFEITLWILLASLAKIGFHLYHKLPTIVPESCLLIMVGLLLGGII--FGV-DEKSPPAMKTDVFFLYLLPPIVLDAGYFMPTRPFFENIGTIFWYAVVGTLWNSIGIGVSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILVFGESLLNDAVTVVLYNLFKSFCQMKTIETIDVFAGIANFFVVGIGGVLIGIFLGFIAAFTTRFTHNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAITACAMTMNKYVEENVSQKSYTTIKYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLMWRALGVFVLTQVINRFRTIPLTFK-DQFIIAYGGLRGAICFALVFLL--PAAVFPRKKLFITAAIVVIFFTVFILGITIRPLVEFLDVKRSNKKQQAVSEEIYCRLFDHVKTGIEDVCGHWGHNFWRDKFKKFDDKYLRKLLIR--ENQPKSSIVSLYKKLEIKHAIEMA 568

The following BLAST results are available for this feature:

BLAST of TCONS_00009440-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009440-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SL9A2	4.745e-158	49.11	Sodium/hydrogen exchanger 2 OS=Homo sapiens GN=SLC...	[more]

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TCONS_00009440-protein (polypeptide) - C. hemisphaerica