TCONS_00009438-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009438-protein
Unique NameTCONS_00009438-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009438-protein ID=TCONS_00009438-protein|Name=TCONS_00009438-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
GVTMLTFVANKCGRLTKVKKVEQFIMSYGGLRGAVAFCLAMLIKEDDTPS
IDGKPSSQEFKQTIVTTTISVVLFTCFIQGTTIKKLVDILGVKKSFKRDK
SMAETVNDRMLGYMVAGIEEIIGVHGHGFWRNLLELFNKKYLRRWLERDP
DNPLDDSLLAHQRRIAFKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005293XLOC_005293Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009438TCONS_00009438Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006153Cation/H_exchanger
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015299solute:proton antiporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006812 cation transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015299 solute:proton antiporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006153Cation/H+ exchangerPFAMPF00999Na_H_Exchangercoord: 14..86
e-value: 1.8E-9
score: 36.8

Blast
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BLAST of TCONS_00009438-protein vs. Swiss-Prot (Human)
Match: SL9A1 (Sodium/hydrogen exchanger 1 OS=Homo sapiens GN=SLC9A1 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.773e-29
Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 0 
Query:    1 GVTMLTFVANKCGRLTKVKKVEQFIMSYGGLRGAVAFCLAMLIKEDDTPSIDGKPSSQEFKQTIVTTTISVVLFTCFIQGTTIKKLVDILGVKKSFKRDKSMAETVNDRMLGYMVAGIEEIIGVHGHGFWRNLLELFNKKYLRRWL 146
            GV  LT+  NK  R+ K+   +QFI++YGGLRGA+AF L  L+ +   P  D            +T  I+V+ FT F+QG TI+ LVD+L VKK  +  +S+ E ++ + L +++ GIE+I G +GH  W++ L  FNKKY+++ L
Sbjct:  428 GVLGLTWFINKF-RIVKLTPKDQFIIAYGGLRGAIAFSLGYLLDKKHFPMCD----------LFLTAIITVIFFTVFVQGMTIRPLVDLLAVKKKQETKRSINEEIHTQFLDHLLTGIEDICGHYGHHHWKDKLNRFNKKYVKKCL 562
The following BLAST results are available for this feature:
BLAST of TCONS_00009438-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SL9A13.773e-2940.41Sodium/hydrogen exchanger 1 OS=Homo sapiens GN=SLC... [more]
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