TCONS_00009364-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009364-protein
Unique NameTCONS_00009364-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length241

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009364-protein ID=TCONS_00009364-protein|Name=TCONS_00009364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MAASKSKYSILLPTYNEKDNLPLIVWLLVKTFTESNINYEIIIIDDGSPD
GTQDVAKQLIDIYGEEHILLRPRAKKLGLGTAYIHGLQFATGDFIIIMDA
DLSHHPKFIPEFIALQQKHDYDVVSGTRYVGNGGVYGWDFKRKLISRGAN
YVTQVLLRPGASDLTGSFRLYKKDVLGKLVSACVSKGYIFQMEMIIRARQ
FGYSIGEVPISFVDRFYGESKLGGNEIYQFAKGLLYLFATT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005246XLOC_005246Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009364TCONS_00009364Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001173Glyco_trans_2-like
IPR029044Nucleotide-diphossugar_trans
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001173Glycosyltransferase 2-likePFAMPF00535Glycos_transf_2coord: 9..178
e-value: 9.0E-35
score: 119.9
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 2..239
e-value: 8.4E-39
score: 133.1
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 5..236
NoneNo IPR availableCDDcd06442DPM1_likecoord: 10..237
e-value: 1.39186E-125
score: 357.228

Blast
[Close]
BLAST of TCONS_00009364-protein vs. Swiss-Prot (Human)
Match: DPM1 (Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens GN=DPM1 PE=1 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.190e-143
Identity = 186/240 (77.50%), Postives = 216/240 (90.00%), Query Frame = 0 
Query:    2 AASKSKYSILLPTYNEKDNLPLIVWLLVKTFTESNINYEIIIIDDGSPDGTQDVAKQLIDIYGEEHILLRPRAKKLGLGTAYIHGLQFATGDFIIIMDADLSHHPKFIPEFIALQQKHDYDVVSGTRYVGNGGVYGWDFKRKLISRGANYVTQVLLRPGASDLTGSFRLYKKDVLGKLVSACVSKGYIFQMEMIIRARQFGYSIGEVPISFVDRFYGESKLGGNEIYQFAKGLLYLFATT 241
            +  ++KYS+LLPTYNE++NLPLIVWLLVK+F+ES INYEIIIIDDGSPDGT+DVA+QL  IYG + ILLRPR KKLGLGTAYIHG++ ATG++IIIMDADLSHHPKFIPEFI  Q++ ++D+VSGTRY GNGGVYGWD KRK+ISRGAN++TQ+LLRPGASDLTGSFRLY+K+VL KL+  CVSKGY+FQMEMI+RARQ  Y+IGEVPISFVDR YGESKLGGNEI  F KGLL LFATT
Sbjct:   21 SPRQNKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
The following BLAST results are available for this feature:
BLAST of TCONS_00009364-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPM15.190e-14377.50Dolichol-phosphate mannosyltransferase subunit 1 O... [more]
back to top