|
Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00009286-protein ID=TCONS_00009286-protein|Name=TCONS_00009286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1307bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00009286-protein vs. Swiss-Prot (Human)
Match: FTM (Protein fantom OS=Homo sapiens GN=RPGRIP1L PE=1 SV=2) HSP 1 Score: 853.588 bits (2204), Expect = 0.000e+0 Identity = 523/1354 (38.63%), Postives = 800/1354 (59.08%), Query Frame = 0
Query: 2 GARDTSALDMTPVRDEKYD-----GI----TISEAKERQMVGSLSRKELEDRYLRVREENVQLKKTSHKQEAKMKQMATKLLRLVKDRKRLEEGGG----IGFVDHESKDKIDELKTTISSLQKQNDLLKSRLTVAKQQLQTHGKRPSAYDHVKSRVFTNQSSPKKTNAKQQRIREQIRVVEPPPLPSKDLHKTPHPVLPQPRYGHSLLEETRLEKRELEDVVDSLRHQLVDYEEKVQYLQEQLTKKEIHHEDSIQQLRQRVSGTQRTTIQENVELIKLQREVRDKVSKLQNLQGKYQNLEDLLKKVKTSHEQVLEEMEKMTSKLKEEQLKNSSLSNELKQGNISQQSLAMKEEQIRDLREEVEMLKEAHGKLLHSTFDAEREREFRTKEKQYQLRIAQLEATIKADVSEKNDVLDKLTFERDTTDSSQKQLRELQVKYFALKEKHDDLLEKLKFFTGESAADFEEIQEALLLIKTRKERESHDLHFLEKVDDNVSRELQKENQQLQAAHADTINELEKTRSMLLIQHNINKDYQREVEATTKKMEELKNECDTRIEEYAQLLDIRAERIKKLEGQLKDVAYGTKQYKVKDDPSELLDNSK---DSTVELERGQNIFEIHIGQIHITKEGVEEFHGVHPISFISYEFFEYELQATPVAQGVRPNYNHTSQYTIQVDDFFLHYLQKESMVLEFHQAIGTEYKTLAKGRVKFNEILDRSHGRLHGKIQLLCEDSD-EEIVTVEYWMRLRVPMEQALRLYKERTKALGYITSN------------DLDKLDHPNSRSLKDSGINELKVDLVQCLKLKSSRKDVQPCPYCVYKFFDFADHDTDIVQSSTSPQFHDQRTFPVPMTEELDNYLKNSNLEVYVFDDADPEATNYIGKASIPLITLSMDKPLSGRFQLNNRNGQSSGVLEVSLSWQYTYLPASAKKVRTYPKPVNTVVEHDEVFTPQKRGNIMQPMVSAGKLFEPKLEQKEEQREDVLEPTYERQRDGPRSNVNIIDSDSDSI-IMPNERDRTMNMDDLAAASSTKKTSLP-------STLKVEGRTGDGK-KKRKSNSSNLETDEDLAADSDEAFLEEELRRTA--EAPIVESPVPRLKDTMFEESEEETDDDIVIPQP-SRRPPPSDERQGGGGGSQISVADSN---GTDEDIVVTTSRPKSV--ARHHSAGACSITIIVSSLTLFDNSPVLEMDRIQQLFVSYKFLDCDPEQLETPISLPKPKANRSISFNFKKVFHVDEEDNETSRQFLMHLLMPDHPNEGRIFFTVVSDPMDDN---DCEDVGIAYVDLIQLMEGGKDVIDADIDVYDLVSDGDDSGDVIGSLTVTVQALDAIQSLY 1306
G D +A D+ PV+D + G+ T K RQ V +SR+ELEDR+LR+ +EN+ LK+ + KQE K+K+MATKL+RLV D+KR E GG +G D E ++ I++L+ + L+KQN+ LK+RL AKQQLQT G R + Y++V+SR+ T + + Q+ R+ I+ D+ +TPHP+ +YG+SLLEE R E R LE+V+ S R Q+ + E + L+ QL +KE E S+ QLR++ + QR+ I++NVE+IKL +++ +K + L ++GK+ L++ + ++ SH+ ++ +++ +LKE++LK SL +L S++ + +++I DL +E E+LKE + KL S F A E +++ KE+Q +++IAQLE +K+D+++K ++LD+L ERD + ++ RELQ++Y K++ D+L +++K + E+ + +E+ EALLLIK +KE+++ DL FL KVD ++++L++ ++LQA HA+T+ ELEKTR+ML++QH INKDYQ EVEA T+KME L+ + + ++E+Y LLDIRA RI KLE QLKD+AYGTKQYK K P + D+S D T+ LERG+N+FEIHI ++ + E ++ P++F +Y F+++ELQ TPV +G+ P YN TSQY + V+D FL Y+QK ++ LE HQA TEY+T+A ++KF+EIL++S GR+ L+ D TVEYW RLRVPM+QA+RLY+ER KALGYITSN K +S D +NEL + + C L+S +QP PY VYKFFDFADHDT I+ SS PQF D FPVPM +LD YLK+ +L YVFDD+D + YIGK ++PLI+L+ D+ +SG F+L + +G + V L W++ YLP S + + + +E Q+ + P S L VL P R PR + +D + IMP++ D T + S + +P + V + +G + K N+ ++ +D + E L E+ ++ E I E P +++ M DD +IP P S+ S G G S A N D + S+ + A HH+ + I I + +L+L D+ ++ D IQ+LFV +F E ETP+SLPKPK+ + + +N+ V +VD+E+N+ R L +L + FTVVSDP +D +CED+G+A+VDL + + G+D+I+ +IDV+D +DG+ IG L VTV+AL A+QS+Y
Sbjct: 3 GPTDETAGDL-PVKDTGLNLFGMGGLQETSTTRTMKSRQAVSRVSREELEDRFLRLHDENILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLG-RDVEMEEMIEQLQEKVHELEKQNETLKNRLISAKQQLQTQGYRQTPYNNVQSRINTGRRKANENAGLQECPRKGIK------FQDADVAETPHPMFT--KYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSAMEGKFIQLQEKQRTLRISHDALMANGDELNMQLKEQRLKCCSLEKQLHSMKFSERRIEELQDRINDLEKERELLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQNEKLVQENRELQLQYLEQKQQLDELKKRIKLYNQENDINADELSEALLLIKAQKEQKNGDLSFLVKVDSEINKDLERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTRKMENLQQDYELKVEQYVHLLDIRAARIHKLEAQLKDIAYGTKQYKFK--PEIMPDDSVDEFDETIHLERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKS-GRIFCTASLIGTKGDIPNFGTVEYWFRLRVPMDQAIRLYRERAKALGYITSNFKGPEHMQSLSQQAPKTAQLSSTDSTDGNLNELHITIRCCNHLQSRASHLQPHPYVVYKFFDFADHDTAIIPSSNDPQFDDHMYFPVPMNMDLDRYLKSESLSFYVFDDSDTQENIYIGKVNVPLISLAHDRCISGIFELTDHQKHPAGTIHVILKWKFAYLPPSGS---ITTEDLGNFIRSEEPEVVQR----LPPASSVSTL--------------VLAP-----RPKPRQRLTPVDKKVSFVDIMPHQSDETSPPPEDRKEISPEVEHIPEIEINMLTVPHVPKVSQEGSVDEVKENTEKMQQGKDDVSLLSEGQLAEQSLASSEDETEITEDLEPEVEEDM----SASDSDDCIIPGPISKNIKQSLALSPGLGCSSAISAHCNFRLPGSSDFPASASQVDGITGACHHTQPSEKIRIEIIALSLNDSQVTMD-DTIQRLFVECRFYSLPAE--ETPVSLPKPKSGQWVYYNYSNVIYVDKENNKAKRDILKAILQKQEMPNRSLRFTVVSDPPEDEQDLECEDIGVAHVDLADMFQEGRDLIEQNIDVFDARADGEG----IGKLRVTVEALHALQSVY 1306 The following BLAST results are available for this feature:
BLAST of TCONS_00009286-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|
