TCONS_00009286-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009286-protein
Unique NameTCONS_00009286-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1307

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009286-protein ID=TCONS_00009286-protein|Name=TCONS_00009286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1307bp
MGARDTSALDMTPVRDEKYDGITISEAKERQMVGSLSRKELEDRYLRVRE
ENVQLKKTSHKQEAKMKQMATKLLRLVKDRKRLEEGGGIGFVDHESKDKI
DELKTTISSLQKQNDLLKSRLTVAKQQLQTHGKRPSAYDHVKSRVFTNQS
SPKKTNAKQQRIREQIRVVEPPPLPSKDLHKTPHPVLPQPRYGHSLLEET
RLEKRELEDVVDSLRHQLVDYEEKVQYLQEQLTKKEIHHEDSIQQLRQRV
SGTQRTTIQENVELIKLQREVRDKVSKLQNLQGKYQNLEDLLKKVKTSHE
QVLEEMEKMTSKLKEEQLKNSSLSNELKQGNISQQSLAMKEEQIRDLREE
VEMLKEAHGKLLHSTFDAEREREFRTKEKQYQLRIAQLEATIKADVSEKN
DVLDKLTFERDTTDSSQKQLRELQVKYFALKEKHDDLLEKLKFFTGESAA
DFEEIQEALLLIKTRKERESHDLHFLEKVDDNVSRELQKENQQLQAAHAD
TINELEKTRSMLLIQHNINKDYQREVEATTKKMEELKNECDTRIEEYAQL
LDIRAERIKKLEGQLKDVAYGTKQYKVKDDPSELLDNSKDSTVELERGQN
IFEIHIGQIHITKEGVEEFHGVHPISFISYEFFEYELQATPVAQGVRPNY
NHTSQYTIQVDDFFLHYLQKESMVLEFHQAIGTEYKTLAKGRVKFNEILD
RSHGRLHGKIQLLCEDSDEEIVTVEYWMRLRVPMEQALRLYKERTKALGY
ITSNDLDKLDHPNSRSLKDSGINELKVDLVQCLKLKSSRKDVQPCPYCVY
KFFDFADHDTDIVQSSTSPQFHDQRTFPVPMTEELDNYLKNSNLEVYVFD
DADPEATNYIGKASIPLITLSMDKPLSGRFQLNNRNGQSSGVLEVSLSWQ
YTYLPASAKKVRTYPKPVNTVVEHDEVFTPQKRGNIMQPMVSAGKLFEPK
LEQKEEQREDVLEPTYERQRDGPRSNVNIIDSDSDSIIMPNERDRTMNMD
DLAAASSTKKTSLPSTLKVEGRTGDGKKKRKSNSSNLETDEDLAADSDEA
FLEEELRRTAEAPIVESPVPRLKDTMFEESEEETDDDIVIPQPSRRPPPS
DERQGGGGGSQISVADSNGTDEDIVVTTSRPKSVARHHSAGACSITIIVS
SLTLFDNSPVLEMDRIQQLFVSYKFLDCDPEQLETPISLPKPKANRSISF
NFKKVFHVDEEDNETSRQFLMHLLMPDHPNEGRIFFTVVSDPMDDNDCED
VGIAYVDLIQLMEGGKDVIDADIDVYDLVSDGDDSGDVIGSLTVTVQALD
AIQSLYE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005193XLOC_005193Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009286TCONS_00009286Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR021656C2-C2_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..127
NoneNo IPR availableCOILSCoilCoilcoord: 420..440
NoneNo IPR availableCOILSCoilCoilcoord: 38..58
NoneNo IPR availableCOILSCoilCoilcoord: 519..553
NoneNo IPR availableCOILSCoilCoilcoord: 337..357
NoneNo IPR availableCOILSCoilCoilcoord: 484..504
NoneNo IPR availableCOILSCoilCoilcoord: 264..326
NoneNo IPR availableCOILSCoilCoilcoord: 197..238
NoneNo IPR availableGENE3D1.10.287.620coord: 198..370
e-value: 0.0027
score: 16.7
coord: 24..171
e-value: 0.098
score: 11.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1004..1122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 950..991
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..191
NoneNo IPR availableCDDcd00030C2coord: 775..882
e-value: 8.63872E-7
score: 47.4467
IPR000008C2 domainSMARTSM00239C2_3ccoord: 774..879
e-value: 7.4E-5
score: 32.1
IPR000008C2 domainPFAMPF00168C2coord: 774..882
e-value: 2.9E-8
score: 33.8
IPR000008C2 domainGENE3D2.60.40.150coord: 770..902
e-value: 1.2E-23
score: 83.1
coord: 1142..1299
e-value: 5.0E-7
score: 29.2
coord: 599..733
e-value: 5.0E-11
score: 42.1
IPR000008C2 domainPROSITEPS50004C2coord: 760..864
score: 9.065
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 592..731
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 770..901
IPR021656RPGR-interacting protein 1, first C2 domainPFAMPF11618C2-C2_1coord: 593..733
e-value: 1.6E-48
score: 164.3

Blast
BLAST of TCONS_00009286-protein vs. Swiss-Prot (Human)
Match: FTM (Protein fantom OS=Homo sapiens GN=RPGRIP1L PE=1 SV=2)

HSP 1 Score: 853.588 bits (2204), Expect = 0.000e+0
Identity = 523/1354 (38.63%), Postives = 800/1354 (59.08%), Query Frame = 0
Query:    2 GARDTSALDMTPVRDEKYD-----GI----TISEAKERQMVGSLSRKELEDRYLRVREENVQLKKTSHKQEAKMKQMATKLLRLVKDRKRLEEGGG----IGFVDHESKDKIDELKTTISSLQKQNDLLKSRLTVAKQQLQTHGKRPSAYDHVKSRVFTNQSSPKKTNAKQQRIREQIRVVEPPPLPSKDLHKTPHPVLPQPRYGHSLLEETRLEKRELEDVVDSLRHQLVDYEEKVQYLQEQLTKKEIHHEDSIQQLRQRVSGTQRTTIQENVELIKLQREVRDKVSKLQNLQGKYQNLEDLLKKVKTSHEQVLEEMEKMTSKLKEEQLKNSSLSNELKQGNISQQSLAMKEEQIRDLREEVEMLKEAHGKLLHSTFDAEREREFRTKEKQYQLRIAQLEATIKADVSEKNDVLDKLTFERDTTDSSQKQLRELQVKYFALKEKHDDLLEKLKFFTGESAADFEEIQEALLLIKTRKERESHDLHFLEKVDDNVSRELQKENQQLQAAHADTINELEKTRSMLLIQHNINKDYQREVEATTKKMEELKNECDTRIEEYAQLLDIRAERIKKLEGQLKDVAYGTKQYKVKDDPSELLDNSK---DSTVELERGQNIFEIHIGQIHITKEGVEEFHGVHPISFISYEFFEYELQATPVAQGVRPNYNHTSQYTIQVDDFFLHYLQKESMVLEFHQAIGTEYKTLAKGRVKFNEILDRSHGRLHGKIQLLCEDSD-EEIVTVEYWMRLRVPMEQALRLYKERTKALGYITSN------------DLDKLDHPNSRSLKDSGINELKVDLVQCLKLKSSRKDVQPCPYCVYKFFDFADHDTDIVQSSTSPQFHDQRTFPVPMTEELDNYLKNSNLEVYVFDDADPEATNYIGKASIPLITLSMDKPLSGRFQLNNRNGQSSGVLEVSLSWQYTYLPASAKKVRTYPKPVNTVVEHDEVFTPQKRGNIMQPMVSAGKLFEPKLEQKEEQREDVLEPTYERQRDGPRSNVNIIDSDSDSI-IMPNERDRTMNMDDLAAASSTKKTSLP-------STLKVEGRTGDGK-KKRKSNSSNLETDEDLAADSDEAFLEEELRRTA--EAPIVESPVPRLKDTMFEESEEETDDDIVIPQP-SRRPPPSDERQGGGGGSQISVADSN---GTDEDIVVTTSRPKSV--ARHHSAGACSITIIVSSLTLFDNSPVLEMDRIQQLFVSYKFLDCDPEQLETPISLPKPKANRSISFNFKKVFHVDEEDNETSRQFLMHLLMPDHPNEGRIFFTVVSDPMDDN---DCEDVGIAYVDLIQLMEGGKDVIDADIDVYDLVSDGDDSGDVIGSLTVTVQALDAIQSLY 1306
            G  D +A D+ PV+D   +     G+    T    K RQ V  +SR+ELEDR+LR+ +EN+ LK+ + KQE K+K+MATKL+RLV D+KR E  GG    +G  D E ++ I++L+  +  L+KQN+ LK+RL  AKQQLQT G R + Y++V+SR+ T +    +    Q+  R+ I+          D+ +TPHP+    +YG+SLLEE R E R LE+V+ S R Q+ + E   + L+ QL +KE   E S+ QLR++ +  QR+ I++NVE+IKL +++ +K + L  ++GK+  L++  + ++ SH+ ++   +++  +LKE++LK  SL  +L     S++ +   +++I DL +E E+LKE + KL  S F A  E +++ KE+Q +++IAQLE  +K+D+++K ++LD+L  ERD  +   ++ RELQ++Y   K++ D+L +++K +  E+  + +E+ EALLLIK +KE+++ DL FL KVD  ++++L++  ++LQA HA+T+ ELEKTR+ML++QH INKDYQ EVEA T+KME L+ + + ++E+Y  LLDIRA RI KLE QLKD+AYGTKQYK K  P  + D+S    D T+ LERG+N+FEIHI ++  + E ++      P++F +Y F+++ELQ TPV +G+ P YN TSQY + V+D FL Y+QK ++ LE HQA  TEY+T+A  ++KF+EIL++S GR+     L+    D     TVEYW RLRVPM+QA+RLY+ER KALGYITSN               K    +S    D  +NEL + +  C  L+S    +QP PY VYKFFDFADHDT I+ SS  PQF D   FPVPM  +LD YLK+ +L  YVFDD+D +   YIGK ++PLI+L+ D+ +SG F+L +     +G + V L W++ YLP S        + +   +  +E    Q+    + P  S   L              VL P     R  PR  +  +D     + IMP++ D T    +     S +   +P       +   V   + +G   + K N+  ++  +D  +   E  L E+   ++  E  I E   P +++ M         DD +IP P S+    S     G G S    A  N       D   + S+   +  A HH+  +  I I + +L+L D+   ++ D IQ+LFV  +F     E  ETP+SLPKPK+ + + +N+  V +VD+E+N+  R  L  +L         + FTVVSDP +D    +CED+G+A+VDL  + + G+D+I+ +IDV+D  +DG+     IG L VTV+AL A+QS+Y
Sbjct:    3 GPTDETAGDL-PVKDTGLNLFGMGGLQETSTTRTMKSRQAVSRVSREELEDRFLRLHDENILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLG-RDVEMEEMIEQLQEKVHELEKQNETLKNRLISAKQQLQTQGYRQTPYNNVQSRINTGRRKANENAGLQECPRKGIK------FQDADVAETPHPMFT--KYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSAMEGKFIQLQEKQRTLRISHDALMANGDELNMQLKEQRLKCCSLEKQLHSMKFSERRIEELQDRINDLEKERELLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQNEKLVQENRELQLQYLEQKQQLDELKKRIKLYNQENDINADELSEALLLIKAQKEQKNGDLSFLVKVDSEINKDLERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTRKMENLQQDYELKVEQYVHLLDIRAARIHKLEAQLKDIAYGTKQYKFK--PEIMPDDSVDEFDETIHLERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKS-GRIFCTASLIGTKGDIPNFGTVEYWFRLRVPMDQAIRLYRERAKALGYITSNFKGPEHMQSLSQQAPKTAQLSSTDSTDGNLNELHITIRCCNHLQSRASHLQPHPYVVYKFFDFADHDTAIIPSSNDPQFDDHMYFPVPMNMDLDRYLKSESLSFYVFDDSDTQENIYIGKVNVPLISLAHDRCISGIFELTDHQKHPAGTIHVILKWKFAYLPPSGS---ITTEDLGNFIRSEEPEVVQR----LPPASSVSTL--------------VLAP-----RPKPRQRLTPVDKKVSFVDIMPHQSDETSPPPEDRKEISPEVEHIPEIEINMLTVPHVPKVSQEGSVDEVKENTEKMQQGKDDVSLLSEGQLAEQSLASSEDETEITEDLEPEVEEDM----SASDSDDCIIPGPISKNIKQSLALSPGLGCSSAISAHCNFRLPGSSDFPASASQVDGITGACHHTQPSEKIRIEIIALSLNDSQVTMD-DTIQRLFVECRFYSLPAE--ETPVSLPKPKSGQWVYYNYSNVIYVDKENNKAKRDILKAILQKQEMPNRSLRFTVVSDPPEDEQDLECEDIGVAHVDLADMFQEGRDLIEQNIDVFDARADGEG----IGKLRVTVEALHALQSVY 1306          
The following BLAST results are available for this feature:
BLAST of TCONS_00009286-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FTM0.000e+038.63Protein fantom OS=Homo sapiens GN=RPGRIP1L PE=1 SV... [more]
back to top