TCONS_00009274-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009274-protein
Unique Name	TCONS_00009274-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1136

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009274-protein ID=TCONS_00009274-protein|Name=TCONS_00009274-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1136bp
MKKLTAIFGSCLFFFVVMTMYLLLDQFQITIDKQKFIEETQNVEKSVNDI
GRDINKLEEEINSNDRIIDSMKDRVQGIDAADPGFQNRPKPIIPIKDNEG
AAPDFGGNSEPSEGMCSFTNTPSGDKQDIRMLDFFDEIPFDDIDGGVWKQ
GWDISYSRNAFDNKKLKVFVMPHSHNDPGWLKTVVSYFNDQTVHIISNIV
DALAKDEKRKFIWAETSYFKMWWDQTSPMRRQLAQEQIRNGQLEIVTGGW
VMNDESNPHYWNMLDQMMEGHIWMQQHIGVKPKYGWAIDPFGYSSTMPYL
LKRMGFEGMLIQRVHYNVKKYLAKKKNLEFMWRQNWDHGKSTDIFTHVMP
FYSYDVPHTCGPNPKVCCQFDFRRLSGGGMFCPWHIPPKRIDDHNVRERA
ETLLDQYKKKAQLYRSNVVLAPLGDDFRYDKEFEVREQFSNYEKLMNYVN
SHPELNAEIKFGTLQDYFHAVFEREGVEPGDHPPGFPTLGGDFFTYADRN
DHYWSGYYTSRSFFKHMDRELMAHLRAAEIIFSLANAHSQHHGNFEGEDL
FHKLSGARKELALFQHHDGVTGTAKDHVVTDYGSRMHRAIKDSVAVMAKS
ANFLLTTDKNQFKDSSEGVQFFKFSETRGNFDSIPTKNTFIVSNSKTSVC
FYNSLAQDRRQTVFLHISEPIVQVTTPDGKVIPHQVSLLWKDSDNLISSK
YLLSFVADIPALGLARYEIKKDDSGQESFATTTTYNTRRSYENRHITVKS
GSGKEIKLKNHHFEATFDVESGLLTDMKLKDRPLHKMQIKFKKYGTTGRM
DKSGAYLFMPDGQATTLNSLNQPVIVTEGKIFSEVRVKTEYVLQIVRVYH
GQVDEAKSLKIENILDIRQTSNFELVMRIESDLKNKEKEFFTDLNGFQIQ
RRKTLAKLPLQANFYPAPALVFLQDGTSRLTLQTQQSNGVASLETGYLEV
VMDRRLMQDDNRGLGQGVRDNKVTPSFFNLLLEDFDTPKQQVAKPPPVAY
QSSLGITLSHQIQHPIFTFFIASTVSGQQYLPLARGLKIQLPCDTHLLNL
KTLPKNIKDEPGDVSTLLLHRIGYDCHFKSHCSERRQTFQDVFDPLTVND
LKETTLSLLHLKKDMNPQTRIDVPPMEIKAFKLKLK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005187	XLOC_005187	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009274	TCONS_00009274	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015341	Glyco_hydro_38_cen
IPR000602	Glyco_hydro_38_N
IPR011682	Glyco_hydro_38_C
IPR027291	Glyco_hydro_38/57_N
IPR028995	Glyco_hydro_57/38_cen
IPR011330	Glyco_hydro/deAcase_b/a-brl
IPR011013	Gal_mutarotase_SF_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006013	mannose metabolic process
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004559	alpha-mannosidase activity
GO:0003824	catalytic activity
GO:0030246	carbohydrate binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006013	mannose metabolic process
molecular_function	GO:0004559	alpha-mannosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..74
None	No IPR available	COILS	Coil	Coil	coord: 397..417
None	No IPR available	GENE3D	2.60.40.1180		coord: 629..723 e-value: 3.8E-12 score: 46.0
None	No IPR available	GENE3D	2.70.98.30		coord: 727..1014 e-value: 4.7E-72 score: 242.0
None	No IPR available	GENE3D	2.60.40.1360		coord: 1038..1134 e-value: 6.7E-22 score: 77.3
None	No IPR available	CDD	cd10809	GH38N_AMII_GMII_SfManIII_like	coord: 165..508 e-value: 0.0 score: 659.727
IPR015341	Glycoside hydrolase family 38, central domain	SMART	SM00872	Alpha_mann_mid_2	coord: 502..586 e-value: 1.5E-28 score: 110.9
IPR015341	Glycoside hydrolase family 38, central domain	PFAM	PF09261	Alpha-mann_mid	coord: 502..585 e-value: 2.8E-23 score: 82.0
IPR015341	Glycoside hydrolase family 38, central domain	GENE3D	1.20.1270.50		coord: 501..617 e-value: 5.4E-29 score: 100.1
IPR000602	Glycoside hydrolase family 38, N-terminal domain	PFAM	PF01074	Glyco_hydro_38	coord: 167..497 e-value: 1.2E-100 score: 336.6
IPR011682	Glycosyl hydrolase family 38, C-terminal	PFAM	PF07748	Glyco_hydro_38C	coord: 648..1132 e-value: 9.9E-61 score: 206.0
IPR027291	Glycoside hydrolase 38/57, N-terminal domain	GENE3D	3.20.110.10		coord: 116..500 e-value: 8.4E-130 score: 432.4
IPR028995	Glycoside hydrolase families 57/38, central domain	SUPERFAMILY	88688	Families 57/38 glycoside transferase middle domain	coord: 502..612
IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel	SUPERFAMILY	88713	Glycoside hydrolase/deacetylase	coord: 125..500
IPR011013	Galactose mutarotase-like domain	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 622..1135

Blast

[Close]

BLAST of TCONS_00009274-protein vs. Swiss-Prot (Human)
Match: MA2A2 (Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3)

HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0
Identity = 503/1161 (43.32%), Postives = 707/1161 (60.90%), Query Frame = 0

Query:    1 MKKLTAIFGSCLFFFVVMTMYLLLDQFQITIDKQKFIEETQNVEKS-VNDIGRDINKLEEEINSNDRIIDSMKDRVQGIDAADPGFQNRPKPIIPIKDNEGA-------APDFGGNSEPSEGMCSFTNTPSGDKQDIRMLDFFDEIPFDDIDGGVWKQGWDISYSRNAFDNKKLKVFVMPHSHNDPGWLKTVVSYFNDQTVHIISNIVDALAKDEKRKFIWAETSYFKMWWDQTSPMRRQLAQEQIRNGQLEIVTGGWVMNDESNPHYWNMLDQMMEGHIWMQQHIGVKPKYGWAIDPFGYSSTMPYLLKRMGFEGMLIQRVHYNVKKYLAKKKNLEFMWRQNWDHGKSTDIFTHVMPFYSYDVPHTCGPNPKVCCQFDFRRLSGGGMFCPWHIPPKRIDDHNVRERAETLLDQYKKKAQLYRSNVVLAPLGDDFRYDKEFEVREQFSNYEKLMNYVNSHPELNAEIKFGTLQDYFHAVFEREGVEPGDHPPGFPTLGGDFFTYADRNDHYWSGYYTSRSFFKHMDRELMAHLRAAEIIFSLANAHSQHHGNFEGEDL--FHKLSGARKELALFQHHDGVTGTAKDHVVTDYGSRMHRAIKDSVAVMAKSANFLLTTDKNQFKDSSEGVQFFKFSETRGNFDSIPTKNTFIVSNSKTSVCFYNSLAQDRRQTVFLHISEPIVQVTTPDGKVIPHQVSLLWKDSDNLISSKYLLSFVADIPALGLARYEIKKDDSGQESFATTTT--YNTRRSYENRH----ITVKSGSGKEIKLKNHHFEATFDVESGLLTDMKLKDRPLHKMQIKFK--KYGTTGRMDKSGAYLFMPDGQATTLNSLNQPVI-VTEGKIFSEVRVKTEYVLQIVRVYHGQVDEAKSLKIENILDIRQTSNFELVMRIESDLKNKEKEFFTDLNGFQIQRRKTLAKLPLQANFYPAPALVFLQDGTSRLTLQTQQSNGVASLETGYLEVVMDRRLMQDDNRGLGQGVRDNKVTPSFFNLLLEDFDTPKQQVAKPPPVAYQSSLGITLSHQIQHPIFTFFIASTVSGQQYLPLARGLKIQLPCDTHLLNLKTLPKNIKDEPGDVSTLLLHRIGYDC-------HFKSHCSERRQTFQDVFDPLTVNDLKETTLSLLHLKKDMNPQTRIDVPPMEIKAFKLKL 1135
            +KK   + G+ +F   V ++YL+LD+ Q    +    +   N  +S ++ +   I +LE+ +  N  II  +KD V  + A   G    P  ++P     G+        P F   S P +  C F     G K +++ML   +E+PFD++DGGVW+QG+DISY  + +D + L+VFV+PHSHNDPGW+KT   Y+ +QT HI++++V  L +D +R+F+WAE S+F  WWD  +  +R   +  + NGQLEI TGGWVM DE+N HY+ ++DQ++EGH W+++++G  P+ GWA+DPFGYSSTMPYLL+R     MLIQRVHY +KK+ A   +LEFMWRQ WD   STDIF H+MPFYSYDVPHTCGP+PK+CCQFDF+RL GG + CPW +PP+ I + NV ERA  LLDQY+KK+QL+RSNV+L PLGDDFRYDK  E   QF NY++L ++ NS P L+ + +FGTL DYF A+++R GVEPG  PPGFP L GDFF+YADR DHYW+GYYTSR F+K +DR L AHLR AE+++SLA AH++  G      L  F  L+ AR+ L LFQHHD +TGTAK+ VV DYG R+ R++ +   V+  +A++L+  DK  +    E   F +  +TR + D++P +    + +S   V  +N L Q+R   V L ++ P V+V + +G+ +  Q+S  W  +   +   Y +S    +PALGL   +++    G  +  ++     + R+   +RH    + V      +  L N + +  F   +GLL  ++  D   H+ Q+  +   YGT    DKSGAYLF+PDG+A        PV+ VTEG  FSEV    E++ Q VR+Y+    E  SL I +++DIR   N EL + I +D+ + +  FFTDLNGFQ+Q R+ L KLPLQANFYP P + ++QD   RLTL T Q+ GV+SL+ G LEV++DRRLMQDDNRGLGQG++DNK T + F LLLE   T   +V      +Y S L    S  +  P     +A        L     L   LPCD HLLNL+TL       P   + L+LHR G+DC        F    S+ +     +F  L V  L+ T+L+LL+     +  T + + PMEI  F+L+L
Sbjct:    3 LKKQVTVCGAAIFCVAVFSLYLMLDRVQHDPTRH---QNGGNFPRSQISVLQNRIEQLEQLLEENHEIISHIKDSVLELTANAEG----PPAMLPYYTVNGSWVVPPEPRPSFFSIS-PQD--CQFALGGRGQKPELQMLTVSEELPFDNVDGGVWRQGFDISYDPHDWDAEDLQVFVVPHSHNDPGWIKTFDKYYTEQTQHILNSMVSKLQEDPRRRFLWAEVSFFAKWWDNINVQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALIDQLIEGHQWLERNLGATPRSGWAVDPFGYSSTMPYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQTWDSDSSTDIFCHMMPFYSYDVPHTCGPDPKICCQFDFKRLPGGRINCPWKVPPRAITEANVAERAALLLDQYRKKSQLFRSNVLLVPLGDDFRYDKPQEWDAQFFNYQRLFDFFNSRPNLHVQAQFGTLSDYFDALYKRTGVEPGARPPGFPVLSGDFFSYADREDHYWTGYYTSRPFYKSLDRVLEAHLRGAEVLYSLAAAHARRSGLAGRYPLSDFTLLTEARRTLGLFQHHDAITGTAKEAVVVDYGVRLLRSLVNLKQVIIHAAHYLVLGDKETYHFDPEA-PFLQVDDTRLSHDALPERTVIQLDSSPRFVVLFNPLEQERFSMVSLLVNSPRVRVLSEEGQPLAVQISAHWSSATEAVPDVYQVSVPVRLPALGLGVLQLQLGLDGHRTLPSSVRIYLHGRQLSVSRHEAFPLRVIDSGTSDFALSNRYMQVWFSGLTGLLKSIRRVDEE-HEQQVDMQVLVYGTRTSKDKSGAYLFLPDGEAKPYVPKEPPVLRVTEGPFFSEVVAYYEHIHQAVRLYNLPGVEGLSLDISSLVDIRDYVNKELALHIHTDI-DSQGIFFTDLNGFQVQPRRYLKKLPLQANFYPMPVMAYIQDAQKRLTLHTAQALGVSSLKDGQLEVILDRRLMQDDNRGLGQGLKDNKRTCNRFRLLLER-RTVGSEVQDSHSTSYPSLLSHLTSMYLNAPALALPVARMQLPGPGLRSFHPLASSLPCDFHLLNLRTLQAEEDTLPSAETALILHRKGFDCGLEAKNLGFNCTTSQGKVALGSLFHGLDVVFLQPTSLTLLYPLASPSNSTDVYLEPMEIATFRLRL 1149

The following BLAST results are available for this feature:

BLAST of TCONS_00009274-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009274-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MA2A2	0.000e+0	43.32	Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=...	[more]

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TCONS_00009274-protein (polypeptide) - C. hemisphaerica