boule-like 1d (polypeptide) - C. hemisphaerica

Overview
Nameboule-like 1d
Unique NameTCONS_00008986-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length232

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008986-protein ID=TCONS_00008986-protein|Name=boule-like 1d|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MSYSTSSHKSSHHSSVMYGTHFPNRLFVGCLHGSITASMLGHYFYKFGPI
IEAKVILDEHQQSRRFGFVTFAFAKDAEKTLKQKKFYLKGHRINVGPAIK
KEHLLNVNMNSSTVKIVKPKQFERTSRYKYIFDEKNKQKYKELSPNAPSF
TPCDSYYTTSTPIPNSTQGSIYPTPPCSPSNLIFKSPPNPPTIMSATLFP
PVGTQTTAPASQHHMFMPNNIFVYPPPELVYF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005033XLOC_005033Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008986TCONS_00008986Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 25..96
e-value: 1.2E-15
score: 68.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 26..92
e-value: 4.6E-12
score: 45.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 24..112
score: 14.129
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 14..105
NoneNo IPR availableGENE3D3.30.70.330coord: 21..102
e-value: 1.4E-16
score: 60.0

Blast
[Close]
BLAST of boule-like 1d vs. Swiss-Prot (Human)
Match: BOLL (Protein boule-like OS=Homo sapiens GN=BOLL PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.771e-16
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 0 
Query:   14 SSVMYGTHFPNRLFVGCLHGSITASMLGHYFYKFGPIIEAKVILDEHQQSRRFGFVTFAFAKDAEKTLKQ-KKFYLKGHRINVGPAIKKEHL 104
            S+  YGT  PNR+FVG +      S L  +F ++G + E K++ D    S+ +GFVTF   +DA+K L++ +K   K  ++N+GPAI+K+ +
Sbjct:   23 SAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV 114
The following BLAST results are available for this feature:
BLAST of boule-like 1d vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BOLL6.771e-1638.04Protein boule-like OS=Homo sapiens GN=BOLL PE=1 SV... [more]
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