TCONS_00008859-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008859-protein
Unique Name	TCONS_00008859-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	327

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008859-protein ID=TCONS_00008859-protein|Name=TCONS_00008859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
KLIIMEEDVWNENVREASSIWLLMGKGYRISRSIRLQWFFQYLNKIISPK
SPEEIVDSEEELEVLAILEGDNEHDLLATKQIQSSESIDQSLLRITPETR
LTFLDRQYRFVYCIDMSPSMAMVDSKTGEVLVDDMFNSIKNSLTGLVQPF
CVGNSPLELSPRLDITVLAHTYTDNKECQVLMQGFCLNSKNINDFLCKLR
RKLRELCERLISGIVENKDKVDNSQGFQKNQTSLFHMIRDSLLALYLLPN
NASAAIVVVTDGVFILENAYFTDALLAQCRNSQSVVSFLQVGTGFQRASV
EFGFVPHCALMQFIATATSGAYLLQCP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004971	XLOC_004971	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008859	TCONS_00008859	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002035	VWF_A

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002035	von Willebrand factor, type A	GENE3D	3.40.50.410		coord: 103..325 e-value: 0.0015 score: 18.1

Blast

[Close]

BLAST of TCONS_00008859-protein vs. Swiss-Prot (Human)
Match: SZT2 (KICSTOR complex protein SZT2 OS=Homo sapiens GN=SZT2 PE=1 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 9.601e-55
Identity = 119/340 (35.00%), Postives = 181/340 (53.24%), Query Frame = 0

Query:    5 MEEDVWNENVREASSIWLLMGKGYRISRSIRLQWFFQYLNKIISPKSPEEIVDSEEELEVLAILEGDNEHDLLATKQIQSSESIDQSLLRITPETRLTFLDRQYRFVYCIDMSPSMAMVDSKTGEVLVDDMFNSIKNSLTGLVQPFCVGNSPLELSPRLDITVLAHTYTDN-KECQVLMQGFCLNS-------KNINDFLCKLRRKLRELCERLISGIVENKDKVDNSQGFQKNQT---------SLFHMIRDSLLALYLLPNNASAAIVVVTDGVFILENAYFTDALLAQCRNSQSVVSFLQVGTGFQRASVEFGFVPHCALMQFIATATSGAYLLQCP 327
            M  +     V EA  ++LLM K YRISR++RL WF  +L++ +     E ++ SE+ELEVL++L              Q  E +      + P TR+TFL  QYRFV  +D+SPS  +VD  TGE+L D++F+++   L GL++PF V  S ++  P + +T+ A++     +  QVL+QG  L+        + I + LC    K+  + ++      + +D+  +S      +           L  MIR  +LAL LLP+N+SA I+V+TDGV  + +    + LL Q R+     SF+QVG G       FG VP+  LM+FIA AT G+YL  CP
Sbjct:    1 MASERPEPEVEEAGQVFLLMKKDYRISRNVRLAWFLSHLHQTVQATPQEMLLQSEQELEVLSVL----------PPGWQPDEPVVPRPFLLVPSTRVTFLAWQYRFVIELDLSPSTGIVDDSTGEILFDEVFHALSRCLGGLLRPFRVPGSCIDFQPEIYVTIQAYSSIIGLQSHQVLVQGCLLDPSQREVFLQQIYEQLCLFEDKVATMLQQQYDPQSQAEDQSPDSGDLLGRKVGVSMVTADLGLVSMIRQGILALQLLPSNSSAGIIVITDGVTSVPDVAVCETLLNQLRSGTVACSFVQVG-GVYSYDCSFGHVPNVELMKFIAMATFGSYLSTCP 329

The following BLAST results are available for this feature:

BLAST of TCONS_00008859-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008859-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SZT2	9.601e-55	35.00	KICSTOR complex protein SZT2 OS=Homo sapiens GN=SZ...	[more]

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TCONS_00008859-protein (polypeptide) - C. hemisphaerica