TCONS_00008793-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008793-protein
Unique NameTCONS_00008793-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008793-protein ID=TCONS_00008793-protein|Name=TCONS_00008793-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
IKYITELKELSSLLRAYSSKFWRGTKDKYLVKMRLCIFLSVIYCLFFLNF
IIAEENLLPRFGTDYYFEKTLYNWNDAEVRCQWRGGHLFVPKDLSEWNLV
YQTAKQKGIHDFWLGLNDKQTEGQFIAVDGATLFYENWTAGEPNNYNNED
CAHSRYDGTWNDHQCLTAKFASVCKMPFHVDMI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004928XLOC_004928Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008793TCONS_00008793Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 51..175
e-value: 5.1E-20
score: 82.5
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 72..175
e-value: 3.4E-18
score: 66.2
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 65..165
score: 19.226
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 53..180
e-value: 3.4E-30
score: 104.5
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 151..174
NoneNo IPR availableCDDcd00037CLECTcoord: 65..176
e-value: 2.61296E-26
score: 97.3053
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 34..178

Blast
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BLAST of TCONS_00008793-protein vs. Swiss-Prot (Human)
Match: CL17A (C-type lectin domain family 17, member A OS=Homo sapiens GN=CLEC17A PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 6.257e-18
Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 0 
Query:   51 IIAEENLLPRFGTDYYFEKTLYNWNDAEVRCQWRGGHLFVPKDLSEWNLVYQTAKQKGIHDFWLGLNDKQTEGQFIAVDGATLFYENWTAGEPNNYNNEDCAHSRYDGTWNDHQC 165
            I   E  LP  G  YYF  +  +W++A + CQ    HL +    +E N V +      +  +WLGLND+  EG +  +DG+ +    W   EPNN ++EDCA     GTWND  C
Sbjct:  252 ITCPEGWLPFEGKCYYFSPSTKSWDEARMFCQENYSHLVIINSFAEHNFVAKAHGSPRV--YWLGLNDRAQEGDWRWLDGSPVTLSFWEPEEPNNIHDEDCATMNKGGTWNDLSC 364
The following BLAST results are available for this feature:
BLAST of TCONS_00008793-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CL17A6.257e-1836.52C-type lectin domain family 17, member A OS=Homo s... [more]
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