TCONS_00008636-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008636-protein
Unique Name	TCONS_00008636-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	563

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008636-protein ID=TCONS_00008636-protein|Name=TCONS_00008636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=563bp
MFGKVTSLVLNDNDLPKPPKLSLDNIQQLLLVKVDDTNDADSLNKSSKDE
DSQSIQKQRDKNWYKTTSAHVKTILQNVLPVLILHNNPKTRLALVDFVGT
LLNKCLLALKDSIPILMDSLAKFLSDDIDEVKMKSQHLLEQVKDDFKTKG
SLDMTGILQNKLHSMFLSLPRIMHSGNDDVKEAHLNIIKGYLIIFGDSFE
DFLSSSSHLKTFFSALLQILEFDTNDVTLVEEKTQFSHLSLTNQSYDGKQ
NNDFTESKKYFKYFSSKNIRLAVNDIIHQMVKNCSIDVIIDHLIGECIED
HRWKLQTIFVLNEVIKSSQQLKDFNAEPYIDQISSIYLQDHLWRVPISNQ
YLQFIETRQEQKDEAKNSVTFESLSLTDIDKPQNEPFSYKNSLTLPFETI
NHNIQLICLLLEGFSTHSYILRTNYNIHLIKTLYPILEKVGSTNATINKT
ALRTLNNLSMYCNYDSLSDLILFNSDYLINAVTLQFRHMMIDSAAPAVLA
VILRLCDKDIMPIVCDSAADVFRLLDEYQEEIAIQMLEVLKQFALAVNKW
FCSEQNETGSNVD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004836	XLOC_004836	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008636	TCONS_00008636	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 374..555 e-value: 3.4E-4 score: 17.8 coord: 55..344 e-value: 1.5E-11 score: 42.1
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 60..221 coord: 396..547 coord: 268..343

Blast

[Close]

BLAST of TCONS_00008636-protein vs. Swiss-Prot (Human)
Match: TTI1 (TELO2-interacting protein 1 homolog OS=Homo sapiens GN=TTI1 PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 2.680e-47
Identity = 139/506 (27.47%), Postives = 257/506 (50.79%), Query Frame = 0

Query:   59 RDKNWYKTTSAHVKTILQNVLPVLILHNNPKTRLALVDFVGTLLNKCLLALKDSIPILMDSLAKFLSDDIDEVKMKSQHLLEQVKDDFKTKGSLDMTGILQNKLHSMFLSLPRIMHSGNDDVKEAHLNIIKGYLIIFGDSFEDFLSSSSHLKTFFSALLQILEFDTNDVTLVEEKTQFS-HLSLTNQSYDGKQNNDFTESKKYFKYFSSKNIRLAVNDIIHQMVKNCSIDVIIDHLIGECIEDHRWKLQTIFVLNEVIKSSQQLK---------DFNAEPYIDQISSIYLQDHLWRVPISNQYLQFIETRQEQKDEAKNSVTFESLSLTDIDKPQNEPFSYKNSLTLPFETI---NHNIQLICLLLEGFSTHSYILRTNYNIHLIKTLYPILEKVGSTNATINKTALRTLNNLSMYCNYDSLSDLILFNSDYLINAVTLQFRHMMIDSAAPAVLAVILRLCDKDIMPIVCDSAADVFRLLDEYQEEIAIQMLEVLKQFALAVNKWF 551
            R+ +W K T   +  +++ ++  + +H + K RL LV+ V  LL KC  +L +    L+ +L   ++D+  E++ +   +L    D     G+  +  IL   LHS+  SLPR+M+S +D  K + L+++ GYL + G      L+S +HL+    AL+Q+LE D  D+ +VEE+   S  L+ + ++   +  N     ++YF++F+ + I + +  +   +    ++ +++DH +    +   ++ Q   +LNE++  +  L+           N E   + ++SI L+++  +    N YL  +   + ++   +  +    L      +   +  S+  + + P  TI   N NI  IC+ LEG    +Y L  ++ + L+  LYP+LEK G     I++ A  T+ ++   C YDSL  LI  NSDYL+N ++L  RH+ +    P VL V+LR  D +++P+V D   DV   LD++ ++ A   + VL     A+ +WF
Sbjct:  275 READWVKKTGDKLTILIKKIIECVSVHPHWKVRLELVELVEDLLLKCSQSLVECAGPLLKALVGLVNDESPEIQAQCNKVLRHFADQKVVVGNKALADILSESLHSLATSLPRLMNSQDDQGKFSTLSLLLGYLKLLGPKINFVLNSVAHLQRLSKALIQVLELDVADIKIVEERRWNSDDLNASPKTSATQPWNRI--QRRYFRFFTDERIFMLLRQVCQLLGYYGNLYLLVDHFMELYHQSVVYRKQAAMILNELVTGAAGLEVEDLHEKHIKTNPEELREIVTSI-LEEYTSQ---ENWYL--VTCLETEEMGEELMMEHPGLQAITSGEHTCQVTSFL-AFSKPSPTICSMNSNIWQICIQLEGIGQFAYALGKDFCLLLMSALYPVLEKAGDQTLLISQVATSTMMDVCRACGYDSLQHLINQNSDYLVNGISLNLRHLALHPHTPKVLEVMLRNSDANLLPLVADVVQDVLATLDQFYDKRAASFVSVLHALMAALAQWF 771

The following BLAST results are available for this feature:

BLAST of TCONS_00008636-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTI1	2.680e-47	27.47	TELO2-interacting protein 1 homolog OS=Homo sapien...	[more]

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TCONS_00008636-protein (polypeptide) - C. hemisphaerica