TCONS_00008604-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008604-protein
Unique NameTCONS_00008604-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length400

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008604-protein ID=TCONS_00008604-protein|Name=TCONS_00008604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
MQRQPSPEKKMKTPLTTLMNEFNDWENAPDPPIIGKVTYCSLELVWNKDL
IDGITGAPKTKSNTSVYSLHSTASTRSNGGCRMKYIVQEEEIGGLVTKGF
GTVYSGFAQRNTFNGLDARTMYRYRIKYKGNGKETPWSRPVEVMTTKKPP
SAEDLHKAVLKNDLEAVQSLLEELDKGVIDACDKFGYTSLMTAVSKGHKD
IARLLIKNHADVDCQTSSNKNALMVASFTGNFEMVRLLHDHGCRNTMTDN
SGSTALHYAVDSGNIDVIRYLIGKGLNVDQKDFTSGWTPLMRLASTSGDL
TVARVLLQNRADANAFDTTHKSVLMMAALNGHTSLVKLLVEKGAKVDLTS
AHNKTALDFARSFDHRQIIIFLESKTKELRKGNNQIPPIGTKKRMTTVSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004812XLOC_004812Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008604TCONS_00008604Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR013783Ig-like_fold
IPR003961FN3_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableCDDcd00204ANKcoord: 247..372
e-value: 4.88363E-32
score: 117.099
NoneNo IPR availableCDDcd00204ANKcoord: 180..307
e-value: 2.03458E-35
score: 126.729
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 252..267
score: 40.69
coord: 335..349
score: 35.02
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 218..249
e-value: 3.2
score: 16.7
coord: 185..214
e-value: 2.0E-4
score: 30.7
coord: 251..280
e-value: 1.6E-6
score: 37.6
coord: 352..381
e-value: 3800.0
score: 0.7
coord: 319..348
e-value: 0.0041
score: 26.4
coord: 150..181
e-value: 2900.0
score: 1.6
coord: 285..315
e-value: 0.12
score: 21.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 322..349
e-value: 0.01
score: 16.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 251..283
score: 13.918
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 319..351
score: 10.927
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 185..217
score: 10.74
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 251..317
e-value: 1.8E-10
score: 41.1
coord: 155..249
e-value: 9.0E-16
score: 58.1
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 260..285
e-value: 2.7E-11
score: 42.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 286..385
e-value: 1.3E-22
score: 79.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 148..259
e-value: 7.4E-33
score: 113.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 150..384
score: 49.472
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 154..375
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 23..147
e-value: 1.4E-7
score: 31.1
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 80..150

Blast
[Close]
BLAST of TCONS_00008604-protein vs. Swiss-Prot (Human)
Match: FANK1 (Fibronectin type 3 and ankyrin repeat domains protein 1 OS=Homo sapiens GN=FANK1 PE=1 SV=3)

HSP 1 Score: 228.409 bits (581), Expect = 9.711e-72
Identity = 123/352 (34.94%), Postives = 197/352 (55.97%), Query Frame = 0 
Query:   29 PDPPIIGKVTYCSLELVWNKDLIDGITGAPKTKSNTSVYSLHSTASTRSNGGCRMKYIVQEEEIGGLVTKGFGTVYSGFAQRNTFNGLDARTMYRYRIKYKGNGKETPWSRPVEVMTTKKPPSAEDLHKAVLKNDLEAVQSLLEELDKGVIDACDKFGYTSLMTAVSKGHKDIARLLIKNHADVDCQTSSNKNALMVASFTGNFEMVRLLHDHGCRNTMTDNSGSTALHYAVDSGNIDVIRYLIGKGLNVDQKDFTSGWTPLMRLASTSGDLTVARVLLQNRADANAFDTTHKSVLMMAALNGHTSLVKLLVEKGAKVDLTSAHNKTALDFARSFDHRQIIIFLESKTKELR 380
            P PP++GKVT+ S+EL W+                     L   A  +       ++ ++EE+        +G +Y+G+A ++   GL+ RT+YR+R+K      E  +S  V V TT++P S+E LH+AV  ND + +  +L+   +  +D  +KFG+T+LM A  KG+  + ++L+ N  DV+ +  S K++LM+A + G+ ++V+ L  HG      D  G TALH+A D G+  VI ++I  G  VD  D  SGWTPLMR+++ SG+  VA +L+   A+ N  D   K+ LM+A LN H  LV+LL++KGA   + +   K  L+ AR FD + ++  LE + K+ R
Sbjct:   12 PHPPVVGKVTHHSIELYWD---------------------LEKKAKRQGPQEQWFRFSIEEEDPK---MHTYGIIYTGYATKHVVEGLEPRTLYRFRLKVTSPSGECEYSPLVSVSTTREPISSEHLHRAVSVNDEDLLVRILQG-GRVKVDVPNKFGFTALMVAAQKGYTRLVKILVSNGTDVNLKNGSGKDSLMLACYAGHLDVVKYLRRHGASWQARDLGGCTALHWAADGGHCSVIEWMIKDGCEVDVVDTGSGWTPLMRVSAVSGNQRVASLLIDAGANVNVKDRNGKTPLMVAVLNNHEELVQLLLDKGADASVKNEFGKGVLEMARVFDRQSVVSLLEERKKKQR 338
The following BLAST results are available for this feature:
BLAST of TCONS_00008604-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FANK19.711e-7234.94Fibronectin type 3 and ankyrin repeat domains prot... [more]
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