TCONS_00008335-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008335-protein
Unique Name	TCONS_00008335-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	513

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008335-protein ID=TCONS_00008335-protein|Name=TCONS_00008335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
MMKSVSRYREFTGPTPHSVAILAKPPSKVPAEHLILERRRIEDLREKSIA
DTKNNKQAFFKSQWEKTTDRQIQKNRIKREVEKNLSYANMILERRRDKLR
EKLLQEEEQYIHELEMKEETTEHRQQRMRERAKELKERREKERQEFVALK
MDQKFRKECEELRSEQSKQLRDEIFRDREHQIQIKQDRKIRDAESERFYA
QLWEQDRIAKADREELETQEQMDRNRSTLDVLNLQRNAVEAQREEEKKMK
EMEAEWLKQEEELRKYEEEMMLKEKKGKQKAARRARDISLKLKEKKEAKE
RQEEIALDMKMLGKILEDSKAQDTEDSNKKKNMRDEMQRFMHYVDRTRRA
DEHRERELEAHINQEVENQWERKDVRKRMEKEARKALMQNVMQTREKQRQ
EREEILRREQQSAQRERQELLEQMDEHRRLESERINRIRIENRQYQNDLE
QQISYQRQLKGKQIDEARRELEITHKAEKTYQRKLRSALNSSTLDRPHPL
RVTGANISRVKTC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004677	XLOC_004677	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008335	TCONS_00008335	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..152
None	No IPR available	COILS	Coil	Coil	coord: 384..433
None	No IPR available	COILS	Coil	Coil	coord: 278..305
None	No IPR available	COILS	Coil	Coil	coord: 229..276
None	No IPR available	COILS	Coil	Coil	coord: 464..484
None	No IPR available	PFAM	PF13868	TPH	coord: 156..487 e-value: 1.7E-9 score: 36.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Blast

[Close]

BLAST of TCONS_00008335-protein vs. Swiss-Prot (Human)
Match: CFA53 (Cilia- and flagella-associated protein 53 OS=Homo sapiens GN=CFAP53 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 6.476e-48
Identity = 168/503 (33.40%), Postives = 286/503 (56.86%), Query Frame = 0

Query:    9 REFTGPTPHSVAILAKPPSKVPAEHLILERRRIEDLREKSIADTKNNKQAFFKSQWEKTTDRQIQKNRIKREVEKNLSYANMILERRRDKLREKLLQEEEQYIHELEMKEETTEHRQQRMRERAKELKERREKERQEFVALKMDQKFRKECEELRSEQSKQLRDEIFRDREHQIQIKQDRKIRDAESERFYAQLWEQDRIAKADREELETQEQMDRNRSTLDVLNLQRNAVEAQREEEKKMKEMEAEWLKQEEELRKYEEEM-MLKEKKGKQKAARRARDISLK-LKEKKE--AKERQEEIALDMKMLGKILEDSKAQDTEDSNKKKNMRDEM---QRFMH-YVDRTRRADEHRERELEAHINQEVENQWERKDVRKRMEKEARKALMQNVMQTREKQRQEREEILRREQQSAQRERQELLEQMDEHRRLESERINRIRIENRQYQNDLEQQISYQRQLKGKQIDEARRELEITHKAEKTYQRKLRSALNSSTL--DRPHPLR 501
            RE  GPTP  V + +KPP    AEH +   RR        +A  K++++   K++W++  D +I  + ++  ++  +    + +E RR+KLRE L  EE +Y  E+++K+ET E ++ RMRE+ K LKE+ EKERQ+FVA K+DQ+FR+ CEELR E     + ++  +R+ QI   ++   +    E+ +++LWE+DR+AK  RE  E + Q +   +T   LN Q  +++AQR+  + +KE EA  ++      K+E E  MLK    KQKA +  R I  K L+E+ E   +E ++E  L+MK++ + L+D +    E+++KKK  R++M   Q+  H Y+ + R  ++ +E+E +  + ++   +   KD   R+EKEAR+ L+  VM TR+ Q QE+ +   +EQ+    E++ + E + E    E E   R +   ++Y+  L+ QI+YQ+Q +  + +E RRE E    A K    K++  L++  +     HP+R
Sbjct:   11 REVKGPTPKVVIVRSKPPKGQGAEHHLERIRRSHQKHNAILASIKSSERDRLKAEWDQHNDCKILDSLVRARIKDAVQGFIINIEERRNKLRELLALEENEYFTEMQLKKETIEEKKDRMREKTKLLKEKNEKERQDFVAEKLDQQFRERCEELRVELLSIHQKKVCEERKAQIAFNEELSRQKLVEEQMFSKLWEEDRLAKEKREAQEARRQKELMENTRLGLNAQITSIKAQRQATQLLKEEEARLVESNNAQIKHENEQDMLK----KQKAKQETRTILQKALQERIEHIQQEYRDEQDLNMKLVQRALQDLQ----EEADKKKQKREDMIREQKIYHKYLAQRREEEKAQEKEFDRILEEDKAKKLAEKDKELRLEKEARRQLVDEVMCTRKLQVQEKLQREAKEQEERAMEQKHINESLKELNCEEKENFARRQRLAQEYRKQLQMQIAYQQQSQEAEKEEKRREFEAGVAANKMCLDKVQEVLSTHQVLPQNIHPMR 505

The following BLAST results are available for this feature:

BLAST of TCONS_00008335-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008335-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CFA53	6.476e-48	33.40	Cilia- and flagella-associated protein 53 OS=Homo ...	[more]

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TCONS_00008335-protein (polypeptide) - C. hemisphaerica