TCONS_00008314-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008314-protein
Unique NameTCONS_00008314-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length147

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008314-protein ID=TCONS_00008314-protein|Name=TCONS_00008314-protein|organism=Clytia hemisphaerica|type=polypeptide|length=147bp
MLYAKITPVRRFKMAEYFKKIPYKQDLPPPGGYAAYVYKSQVKPRGPSGV
AIMAGGLAVMGIGFYFVSKGNQNRRELVREQKMARIHLLPLLQAEQDRLN
LKRLKENLETEKAIMKDVEGWDLSQSVYNVYNTDRWVPPRDFQLEKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004670XLOC_004670Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008314TCONS_00008314Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009346GRIM-19
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..114
IPR009346GRIM-19PFAMPF06212GRIM-19coord: 23..140
e-value: 3.2E-35
score: 120.9

Blast
[Close]
BLAST of TCONS_00008314-protein vs. Swiss-Prot (Human)
Match: NDUAD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens GN=NDUFA13 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.814e-31
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 0 
Query:   24 KQDLPPPGGYAAYVYKSQVKPRGPSGVAIMAGGLAVMGIGFYFVSKGNQNRRELVREQKMARIHLLPLLQAEQDRLNLKRLKENLETEKAIMKDVEGWDLSQSVYNVYNTDRWVPP 139
            KQD+PPPGGY    YK  +  RG SG +++A G+  +  G + + K N+ RR L  E   ARI LLPLLQAE DR  L+ L+ENLE E  IMKDV  W + +S   V++T RWVPP
Sbjct:    7 KQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKVGES---VFHTTRWVPP 119
The following BLAST results are available for this feature:
BLAST of TCONS_00008314-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDUAD1.814e-3150.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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