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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00008256-protein ID=TCONS_00008256-protein|Name=TCONS_00008256-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1732bp
MTVTSSANTLMVQFVSDGSVGDRGVKIVWEQIPKITITDINKVSFQDPWL
GKVSPAGVKIIESGLSSMSIWIVDQFNDVHYYDGFSWDVLKGKAKTLSVG
ETSIFGIEPRNNYIVMRQNAKYSNPKGDSWRIISQNDKNIQFLESTNFDI
LYGIDQNNVLYYANKYDLNQLDEKWKRVANLDTISNNGDAINEISCNHFS
CWVVTTSGTVYSMKTPWDPTKAEWTRDYGKYIHVSAGHGDNIWAVNEYGD
VYKKKGVNSMQPFGGDWQQIFGATLSQINAGLTGIFGATKNGYLVVHKDK
ICGDVLNDKSGGLTSPGYPNSYPEGLSCLWVIKPQDAKTIKVNFDDNFNI
QRLPACEDYLVTSYPGIREPIVECGKDVLDKTVEAEQVWIEFVTNTDGDV
GSGFKLSYDSSDQIMTTPSTKTTKAPSSTPPPSGWQILRPDTYFGRDIEI
KSIRTVSPDTMWILTKSNDVFVFYQNRLIPVPGIKATSLAVSPYGVWALD
VNGHIHYRDGVTRTNPEGSTWRFTNRNNKNFKEISNGPYGTVIVLKNDRT
LDYCSWLPNRRNELNCQDIQSNVQKFTSTLYGVWTILTDGRLAFNNFVRS
PSNLGKYIIKTSDGFTVRPKDIISSINGDILFGILPNGSLVQHGGLTNLR
PFGFPNVWIVHPIQGSKLHQHIYEIIIEMIGGELVEKKVTPKDLPTSSTW
NVIRNNVFMPHKVDVFPTNKKLDVWVLGGPLRNEAYTSVYDPQSSRNELS
FARQIRLEDGGSAAFKDISIGESGVWALDDSHQPLYFNSDSKRWSEINSK
TPTGQKLAWKSIEAASPNIVYAIELFQGNLYFRDGINPENPKGEKWVNTG
LKVTQVSSNPYVTYIITKDSGEFKSFTTPPTSQNLKTWITSLVSHNKKIT
NKLSVGFGNSMAFLDESDKLVVRERLPLKNEQYGSIWSWRQEDVVLSDVA
AGPVMFGIFNNKLVASKREPVCFHYNKDVVENLAIDISRTKEYCDILVKT
KDPFSFDVKVTKGPNTGSGCSISYAQNIGAEVTERTCAVQPLDVPEDRDR
LYYSVHQAPRSSPGFRPQDITLLFSPIENEASNCGEEFTNDDGSLMSRNY
PNNYPNNEDCVWLIKASKDYRVQLTIEDLDIERGGSVCEYDSLRIYDGSK
DTDTELARYCTALRNTQLVSSGPEMRLHFKTDSSGNQKGFKLKWKFVKKQ
PDIIIPSGWKEVYPNHKFTKISGDLASRIIAIKPDDDRSYHVFSTRSQSS
PILMSRDSLSDVSIGPSGAWAISTDGKVYFIRNLVDGRINTWNRVTNNQN
AGKLVKIISGPLNVYAINQQGAVFTRVGINPQNPSGTGWRSLDRAVDLAE
NVFGVWFLRDDGKIEFSRHSDTSTSQVQSPSDKKIQNIISGINTFYLIAG
GELFERVGISSKTPEGPSWRSMGFVGAKDMGIIQNKLAILLIDGKVVHRD
VTSCGGIMNQRTNTIRHPSNGQSRYQNNQRCVWLIKADGYDRIEFKQNQM
DLEPSQYCQKDRVTFIPISDETTNEVQRVDICQKDTLTNGMLNLDSNYVI
VEFVSDVSGQRRGFIFSYQAFRGAATTKATTTTTTTTTTTTTTPLTTRST
STKPKECGTTLTNPTGFIASPNYPGNYPSNLKCVYRIRLDSGKRIKLTYM
RIDIEDGGIQCQYDALMVYDIQPNGNRKLVKKLCGTRGQGEHYTSEGNAM
DILFNTDGSGVKTGFSLKYVDTAKIATTPKPG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000859 | CUB domain | SMART | SM00042 | CUB_2 | coord: 1607..1722
e-value: 1.6E-30
score: 117.4
coord: 1454..1571
e-value: 1.4E-13
score: 61.2
coord: 302..411
e-value: 8.1E-13
score: 58.6
coord: 1084..1197
e-value: 1.5E-36
score: 137.5 |
| IPR000859 | CUB domain | GENE3D | 2.60.120.290 | | coord: 1..35
e-value: 0.013
score: 15.1
coord: 294..414
e-value: 2.7E-16
score: 59.3
coord: 1446..1573
e-value: 5.0E-19
score: 68.1 |
| IPR000859 | CUB domain | GENE3D | 2.60.120.290 | | coord: 1079..1201
e-value: 6.1E-37
score: 125.9 |
| IPR000859 | CUB domain | GENE3D | 2.60.120.290 | | coord: 1597..1720
e-value: 2.0E-30
score: 105.1 |
| IPR000859 | CUB domain | PFAM | PF00431 | CUB | coord: 1607..1719
e-value: 2.5E-24
score: 85.7
coord: 302..408
e-value: 3.7E-14
score: 52.9
coord: 1454..1568
e-value: 1.3E-12
score: 47.9
coord: 1084..1193
e-value: 1.5E-28
score: 99.3 |
| IPR000859 | CUB domain | PROSITE | PS01180 | CUB | coord: 1454..1571
score: 15.172 |
| IPR000859 | CUB domain | PROSITE | PS01180 | CUB | coord: 1607..1722
score: 24.424 |
| IPR000859 | CUB domain | PROSITE | PS01180 | CUB | coord: 1084..1197
score: 23.746 |
| IPR000859 | CUB domain | PROSITE | PS01180 | CUB | coord: 302..411
score: 18.251 |
| IPR000859 | CUB domain | CDD | cd00041 | CUB | coord: 1607..1719
e-value: 1.81586E-28
score: 112.121 |
| IPR000859 | CUB domain | CDD | cd00041 | CUB | coord: 1084..1196
e-value: 1.80653E-24
score: 100.565 |
| IPR000859 | CUB domain | CDD | cd00041 | CUB | coord: 302..408
e-value: 4.27861E-15
score: 73.2154 |
| IPR000859 | CUB domain | CDD | cd00041 | CUB | coord: 1454..1570
e-value: 1.20812E-15
score: 74.7562 |
| IPR000859 | CUB domain | SUPERFAMILY | 49854 | Spermadhesin, CUB domain | coord: 302..409 |
| IPR000859 | CUB domain | SUPERFAMILY | 49854 | Spermadhesin, CUB domain | coord: 1083..1197 |
| IPR000859 | CUB domain | SUPERFAMILY | 49854 | Spermadhesin, CUB domain | coord: 1606..1719 |
| IPR000859 | CUB domain | SUPERFAMILY | 49854 | Spermadhesin, CUB domain | coord: 1451..1571 |
| IPR006624 | Beta-propeller repeat TECPR | SMART | SM00706 | tecpr | coord: 476..510
e-value: 1.6
score: 17.4
coord: 128..165
e-value: 99.0
score: 4.5
coord: 222..256
e-value: 5.4
score: 13.5
coord: 85..119
e-value: 100.0
score: 4.3
coord: 1290..1328
e-value: 3.8
score: 14.6
coord: 265..299
e-value: 250.0
score: 1.6
coord: 792..835
e-value: 5.3
score: 13.6
coord: 1249..1283
e-value: 3.6
score: 14.8 |
| IPR006624 | Beta-propeller repeat TECPR | PFAM | PF06462 | Hyd_WA | coord: 1314..1340
e-value: 7.3E-6
score: 25.8
coord: 496..523
e-value: 8.0E-9
score: 35.2 |
| None | No IPR available | GENE3D | 2.130.10.30 | | coord: 1232..1413
e-value: 2.9E-6
score: 26.1 |
| None | No IPR available | GENE3D | 2.130.10.30 | | coord: 681..965
e-value: 0.0064
score: 14.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1585..1607 |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | SUPERFAMILY | 50985 | RCC1/BLIP-II | coord: 1259..1404 |
Blast
BLAST of TCONS_00008256-protein vs. Swiss-Prot (Human)
Match: TLL1 (Tolloid-like protein 1 OS=Homo sapiens GN=TLL1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.699e-18 Identity = 72/277 (25.99%), Postives = 119/277 (42.96%), Query Frame = 0
Query: 1452 TSCGGIMNQRTNTIRHPSNGQSRYQNNQRCVWLIKADGYDRIEFKQNQMDLEPSQYCQKDRVT-FIPISDETTNEVQRVDICQKDTLTNGMLNLDSNYVIVEFVSDVSGQRRGFIFSYQAFR--------GAATTKATTTTTTTTTTTTTTPLTTRSTSTKPKECGTTLTNPTGFIASPNYPGNYPSNLKCVYRIRLDSGKRIKLTYMRIDIEDGGIQCQYDALMVYDIQPNGNRKLVKKLCGTRGQGEHYTSEGNAMDILFNTDGSGVKTGFSLKY 1719
+CGG++ + TI P Y N+ CVW + A RI K +LE ++ C+ D V + +S E+ + + +T+ N+ +EF SD + ++GF + + + G T + L K EC + +P+G I SPN+P YPS +C + I G RIKL + +IE +C YD L V+D + ++ +LCG + + + GN M + F +D S + GF +
Sbjct: 616 AACGGLLTKLNGTITTPG-WPKEYPPNKNCVWQVVAPTQYRISVKFEFFELEGNEVCKYDYVEIWSGLSSESKLHGKFCGAEVPEVITSQFNNMR-----IEFKSDNTVSKKGFKAHFFSDKDECSKDNGGCQHECVNTMGSYMCQCRNGFVLHDNKHDCKEAECEQKIHSPSGLITSPNWPDKYPSRKECTWEISATPGHRIKLAFSEFEIEQHQ-ECAYDHLEVFDGETE-KSPILGRLCGNK-IPDPLVATGNKMFVRFVSDASVQRKGFQATH 883
The following BLAST results are available for this feature:
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