TCONS_00008166-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008166-protein
Unique NameTCONS_00008166-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1278

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008166-protein ID=TCONS_00008166-protein|Name=TCONS_00008166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1278bp
MSSKKSSDRSKLNVYVRCRPHLQQDLSQYSTLSFPSRQEVIVNDETKELN
FKFDHVFPSDASFKEMFDVTVEPLVTSFLSGVSSSLMAYGQVSTGKTFNM
LTGNIGLVHQGIEHIFTSIQQCNKYSYKIVFSFLQIYQDRIYDLLTQQDR
NSNLHLREHPKEGIIVEGLSEQIIENFTEADKLLALGKERFVVSENTKTL
QLQSRSHVICIVKMEKSKKQTSESPSEKTKTKRIRSKLFLCDLAGSERLN
KSGVSRRHIEEARYINTSLLEFGNVIHALTSRSSLYVPFRNSTLTRILKE
SLGGNSKASLMVCVSPALNDLLETKYSLNFGQRAMKVVKQASPNVEPRTD
SHWLNYPLFRRRKNKKIDYRKLAEYLTSKLKDLEVAYNKEKENLRHLKRK
LSKKRSDFLKNVTSESESGGDSNESTPSKVLTTRRLSILLEESTTLDIGL
ANPALDTSPNPMTSSQEPQFFSKSVLTTEVQTHISGLDNKVKSEATQTLL
NEQKSCHTSTTCLLDNRCHDKSINTSVQSLHGDMVSKTTSMHSILSNQAV
ISRSVNTSVQSFEAFTEREEKSLVNRSTDTLSLNRVESVKSFDRSTSMGS
IQVDQTMKEDFVTLERSTSMDGQILIKQVIVKTDFQALERSSSMEVNPEC
FPSENSLMKKTETFDKSTSIGSLASLSEHPKERKSVELKLELAPQSMEVP
KQNCLVISPVAIHEFIESPTNTNQEDEPNHVTSNEPIESNLLITATNSDL
SLVNYRCTDADSEISLREAKILQSPREIDAVDCAIPKNFYVGSNPVSPIS
QFPFMSFESEVEHIYREDTRYARKSLVKARNRYSALLQQLELLTSEDFTI
QDGGQSSAGSSNSECHDIVLKFKTELEEELRKAKEKLQGSPTKSQSYAFG
TATRTNKDSTVIDCVEGERVLGCPQDVSSLHKQQLLSGSSESEYSDKTPS
GVFGEDLVQRSREINNNEGEMLMISRSPTEGSNEAPSEMKGAISLEFENV
ATFEEDKKLSKQDEKFKKQQKLTMAAIENAEIKKELLMTKLEKLRLEAVL
SCVLIDTETNDMTKEFQQLSMRSMKLLTSSKSTLASTTSCAHLPSISSPG
STFKHLQSPKKRFNYKERFVGGDHVINDVKYAGKVSLPDEASSGCTRSVQ
TEQNVVDWLNNDHVQKKLVHEESSCQSSSDFDVSSISDLGSPLLLTRRMS
PCGQDDASPFCPGDFMYDTNFDEVDKLLMQYKKKKPSSSNSAFSCFPFLR
NKSKQRMRNTLQNRPSETIEFSKFHPDC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004599XLOC_004599Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008166TCONS_00008166Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR019821Kinesin_motor_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 373..407
NoneNo IPR availableCOILSCoilCoilcoord: 1027..1047
NoneNo IPR availableCOILSCoilCoilcoord: 826..846
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..429
IPR001752Kinesin motor domainPRINTSPR00380KINESINHEAVYcoord: 237..255
score: 55.83
coord: 197..214
score: 33.24
coord: 81..102
score: 42.23
coord: 287..308
score: 56.7
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 9..345
e-value: 6.8E-80
score: 281.4
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 35..337
e-value: 6.9E-78
score: 261.8
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 3..351
e-value: 1.1E-92
score: 309.9
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 11..337
score: 82.177
IPR019821Kinesin motor domain, conserved sitePROSITEPS00411KINESIN_MOTOR_1coord: 236..247
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..344

Blast
[Close]
BLAST of TCONS_00008166-protein vs. Swiss-Prot (Human)
Match: KIF4A (Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 2.854e-50
Identity = 118/351 (33.62%), Postives = 190/351 (54.13%), Query Frame = 0 
Query:   12 LNVYVRCRPHLQQDLSQ--YSTLSF-PSRQEVIVNDETKELNFKFDHVFPSDASFKEMFDVTVEPLVTSFLSGVSSSLMAYGQVSTGKTFNMLTG---------NIGLVHQGIEHIFTSIQQCNKYSYKIVFSFLQIYQDRIYDLLTQQDRNSNLHLREHPKEGIIVEGLSEQIIENFTEADKLLALGKERFVVSENTKTLQLQSRSHVICIVKMEKSKKQTSESPSEKTKTKRIRSKLFLCDLAGSERLNKSGVSRRHIEEARYINTSLLEFGNVIHALTS-RSSLYVPFRNSTLTRILKESLGGNSKASLMVCVSPALNDLLETKYSLNFGQRAMKVVKQASPNVEPRT 349
            + V +RCRP + +++S+     LSF P   +V+V  +    +F +D VF      +E+F+  V PL+     G +++++AYGQ  +GKT++M             +G++ + I+ +F  I + + + + +  S+L+IY + I DLL      + +++RE PKEGI + GL+E+ +    +    L  G     V+      Q  SRSH I  + +E+ KK          K    RSKL L DLAGSER  K+      ++E   IN  LL  GNVI AL   +   +VP+R+S LTR+L++SLGGNS   ++ CVSPA ++L ET  +L +  RA K+  +   N++P+T
Sbjct:   10 VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDK---SFTYDFVFDPSTEQEEVFNTAVAPLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDKKSDFEFTLKVSYLEIYNEEILDLLCPSREKAQINIREDPKEGIKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQ-SSRSHAIFTISLEQRKK--------SDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIVNIDPQT 348
The following BLAST results are available for this feature:
BLAST of TCONS_00008166-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF4A2.854e-5033.62Chromosome-associated kinesin KIF4A OS=Homo sapien... [more]
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