TCONS_00008134-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008134-protein
Unique NameTCONS_00008134-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length649

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008134-protein ID=TCONS_00008134-protein|Name=TCONS_00008134-protein|organism=Clytia hemisphaerica|type=polypeptide|length=649bp
MENKTMLFYIAGLLLFATIGIQAQRSPSKTFLEVVGLSERVVGGKPVSQG
MFPWIVFIQANHKYKNNTQTSNLCGGSLIHERWVLTAAHCLPHGERTTRV
VVHIGKKSPVSFSQSRTNLPAEKYRVRSIFIHPNYAGSGFSGADLALLHL
PRPSKHPTIRLAISPVDDKWYESGSIATVAGWGSTSPHDTQQISQELRSA
EVKVVSHKKCNKANSFNGSVLKDMFCASGDGKDACYSDSGGPLMVRDGCR
DEWVLIGVVSWGKSCAHKDYPGVYVKLSVYSDWLMDRLYPGRQKSYLSTQ
CCCRHQNNEIDENALRTKFKKKRHNEHPANMKLVHLQSRGFSGHYRLLKG
PQGPPGEPGRRGSAGLPGRQGPPGDRGKQGPRGRVGAAGKPGLPGNPGKL
IGANDKIYSSLEEVNRVLDEVKKLKTELEMTIRETRLGRTIEHAARTCQD
IFRSNTGLVNSGKYWLSPQQYDDSAFVGYCNMDDVGGGWTLVYSFKVLRH
QNKSLEMVPKPKWRKHEHKEEGASDTAPKYPKDHGAVDYNLWRYIGAEIL
IKSVRGDWLKCKSSEASSRYLDIFPPTSSLKKRPIIHKLDCEIVKNEHES
VSGCLRLPEAIMWNRSGLVMTESSLLDWAIQKHCSGDQRIDDEVLFYIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004584XLOC_004584Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008134TCONS_00008134Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR008160Collagen
IPR000885Fib_collagen_C
IPR014716Fibrinogen_a/b/g_C_1
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
IPR002181Fibrinogen_a/b/g_C_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO:0005201extracellular matrix structural constituent
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0005201 extracellular matrix structural constituent
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 411..434
NoneNo IPR availableGENE3D2.40.10.10coord: 41..83
e-value: 1.4E-17
score: 63.0
NoneNo IPR availableGENE3D2.40.10.10coord: 84..302
e-value: 5.9E-58
score: 195.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..400
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 75..90
score: 66.22
coord: 232..244
score: 60.6
coord: 140..154
score: 32.16
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 40..284
e-value: 5.4E-69
score: 245.2
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 41..284
e-value: 2.3E-54
score: 184.4
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 41..289
score: 32.405
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 41..286
e-value: 5.80136E-74
score: 238.33
IPR008160Collagen triple helix repeatPFAMPF01391Collagencoord: 349..399
e-value: 6.0E-10
score: 38.6
IPR000885Fibrillar collagen, C-terminalPFAMPF01410COLFIcoord: 417..517
e-value: 5.9E-7
score: 28.9
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 402..545
e-value: 2.0E-8
score: 33.9
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 85..90
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 7..287
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 441..494

Blast
[Close]
BLAST of TCONS_00008134-protein vs. Swiss-Prot (Human)
Match: TM11D (Transmembrane protease serine 11D OS=Homo sapiens GN=TMPRSS11D PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.593e-39
Identity = 89/256 (34.77%), Postives = 130/256 (50.78%), Query Frame = 0 
Query:   33 EVVGLSE-RVVGGKPVSQGMFPWIVFIQANHKYKNNTQTSNLCGGSLIHERWVLTAAHCLPHGERTTRVVVHIGKKSPVSFSQSRTNLPAEKYRVRSIFIHPNYAGSGFSGADLALLHLPRPSKHPT-IRLAISPVDDKWYESGSIATVAGWGSTSPHDTQQISQELRSAEVKVVSHKKCNKANSFNGSVLKDMFCAS--GDGKDACYSDSGGPLMVRDGCRDEWVLIGVVSWGKSCAHKDYPGVYVKLSVYSDWL 284
            +++ LSE R++GG    +G +PW V ++ N+ +         CGGSLI+  W+LTAAHC                +  ++ S   T  P  + RVR+I IH NY  +     D+AL+ L         I     P   +    GS A V GWG+           ELR  +V+++S+  CN  +S+NG++L  M CA     G DAC  DSGGPL V++  R  W ++G+VSWG  C   D PGVY +++ Y DW+
Sbjct:  178 DLITLSEQRILGGTEAEEGSWPWQVSLRLNNAHH--------CGGSLINNMWILTAAHCFRSNS---------NPRDWIATSGISTTFPKLRMRVRNILIHNNYKSATHEN-DIALVRLENSVTFTKDIHSVCLPAATQNIPPGSTAYVTGWGAQ--EYAGHTVPELRQGQVRIISNDVCNAPHSYNGAILSGMLCAGVPQGGVDACQGDSGGPL-VQEDSRRLWFIVGIVSWGDQCGLPDKPGVYTRVTAYLDWI 412
The following BLAST results are available for this feature:
BLAST of TCONS_00008134-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM11D3.593e-3934.77Transmembrane protease serine 11D OS=Homo sapiens ... [more]
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