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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00007912-protein ID=TCONS_00007912-protein|Name=TCONS_00007912-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1586bp
MEGKTEINLTVTDTLGLVQDIETVTICGDERSVLPIATNMAPYTGDDEDA
PYNGNIHLREFQTYKVTTPNFTDKIEKNFEFCTSEPIWNAKQKVLIEFAS
NKDLVDALNFGFYMPPSGGRAGKFLDEQRTFKDYPMDRTSGSLEFRYKRR
IFRHLHLQDEKKLQKINTKKYRKKFFEHIYARNLPEMEKLLKKGLDPNFQ
DEKSGETPLTATAMLDDCMEMLKILIQYGSYMDFRTKAGKTALHNVAIIG
KDVALKNLLDLGASPNYRDSKGLTPLYQSIQFGSNPLICELLLKEKSLLG
ITDFHGCEEIHQACKLGYVQHVEHLVFYGANVNAKTASGNTPLHICALEN
QESCARVLLFRGADRSTANYAQQTAYDVAILSNNLDVALLLNDFDPRNVT
PFKHKPDYVERKRLATLTDGTRPPSQAISPQLSLDGSSIASGEGESETSS
GRSSPVPLQKRLKATSTPANMHTLGLMRQRKASTGSLPETVEEHSESDEE
SEDDDQLKPMKPMRTFSNAGVGTKRSPAPMRIAPKSQHVRTRLYASVPGR
SFVAIKDYEAASQGELALKKGDSVEVLYVGEAGFWEGSVRGRAGWFPSAC
VQEVKKGDSLRGKRTWLGGKKKSPVADIFAEGDVPKPRVITLKKSDKQGF
GFQMRGANSHLPHIDFQPSPQFPALQYIGEVDKGGVAEKAGLKPGDFVLE
LNHENVVNATHGYAVSLISGGGKSLTIKVITIAPVTSENGIHTPNGSING
TLPKSQKTPPPAPPVRSNSTVLSNFSTPDDSVLAEGSVATVGVETMTLDT
NKTRSTSAKGMWSGTAYRLQGDESVHQEDHNISTGIRKVSGMNTDLATRF
DERLKSMTQQTAVDKTQYPEHKRSNSSLSSNSSNSSEHSIENRPRRKPTP
PGYDHTIDNMRRGRTNSLGRGDNARPPVIVKRSQTEDHSPGQMNGNRQPS
PNTNRHSMYDEFNYDNRQRHMLPDKHQIEIPQQYATTRRYNRNDPTTAYN
HPTVQYRDPRVREDNRMKGRPQSEVLIPRDYMDAQQLPPQQPRGQFPGGY
DPQQQTQQRYPGQYNTLQTHHMHQNQRRQETVLEKHQRKYLDNEQYNRPP
PTMHLDLRLQQQPPPQMDKLAVQTTRMINGDGLIRNQNQRMVIQPTPPPP
PPPQQPPTPPQGTAMPPPPPPPPPPPAPPTANENSLGNSIASAALARSNR
TKNESVEAQMERQKSEQNEALSRRDSSPGSDTARLYTSGSSVSLDSSSSK
DSGFDNSVDDHSNALAQAIAARAAKMSSKENTTNLPATKELPEEKTNTVE
ETSLVKPSDMIKQMRSLSTSAGTKKTRDLNANDIDKGYSSPTSSRPRCKS
DAPPPAVMKKPKRQTSNKSNLSEDTATAFLDGVLADAEASIDYDLISNAS
TSSFEKNNNVIKENKPPIKKVATLTIRCGVDNKPTTTSVQMTTPPNNTTE
ELDFTDLPPPPMEFLGEELENDDVSPDIVESKNISFGQRTRSDSISSNRS
VSSTRSVLSLPLSLQDKYFMDWTCVEVIEWLEHLSLGQYKDTFVDNDIEG
KHLPDLSKDELKELGIKKLGHRMTLDDAIVKLKTMT Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1203..1223 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 543..611
e-value: 5.0E-17
score: 60.6 |
| None | No IPR available | GENE3D | 3.10.20.90 | | coord: 65..148
e-value: 3.9E-6
score: 26.3 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 636..731
e-value: 2.6E-18
score: 65.6 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 1515..1586
e-value: 1.5E-20
score: 72.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 415..529 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1093..1113 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 740..768 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1141..1373 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 858..959 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1435..1457 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1036..1057 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 637..730
e-value: 1.00144E-20
score: 88.3926 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 233..391
e-value: 2.7374E-27
score: 108.625 |
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 648..733
e-value: 1.5E-14
score: 64.3 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 640..729
e-value: 2.6E-8
score: 34.0 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 639..733
score: 14.878 |
| IPR001478 | PDZ domain | SUPERFAMILY | 50156 | PDZ domain-like | coord: 636..730 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 305..334
e-value: 4.9
score: 16.1
coord: 271..301
e-value: 1300.0
score: 4.1
coord: 238..267
e-value: 2.5
score: 17.1
coord: 338..367
e-value: 0.013
score: 24.7
coord: 371..401
e-value: 1900.0
score: 2.9
coord: 204..234
e-value: 220.0
score: 9.9 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 338..370
score: 10.953 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 305..337
score: 9.19 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 238..270
score: 10.045 |
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 1519..1585
e-value: 1.7E-16
score: 70.8 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF00536 | SAM_1 | coord: 1522..1583
e-value: 1.2E-17
score: 64.0 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 1522..1585
score: 18.989 |
| IPR001452 | SH3 domain | SMART | SM00326 | SH3_2 | coord: 550..605
e-value: 2.8E-15
score: 66.8 |
| IPR001452 | SH3 domain | PROSITE | PS50002 | SH3 | coord: 547..606
score: 13.073 |
| IPR001452 | SH3 domain | SUPERFAMILY | 50044 | SH3-domain | coord: 538..606 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 310..391
e-value: 2.3E-8
score: 34.4 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 150..505
e-value: 5.8E-47
score: 159.6 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 187..391
score: 44.352 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 175..393 |
| IPR011511 | Variant SH3 domain | PFAM | PF07653 | SH3_2 | coord: 552..604
e-value: 3.5E-13
score: 48.9 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 1519..1584 |
Blast
BLAST of TCONS_00007912-protein vs. Swiss-Prot (Human)
Match: SHAN3 (SH3 and multiple ankyrin repeat domains protein 3 OS=Homo sapiens GN=SHANK3 PE=1 SV=3) HSP 1 Score: 504.982 bits (1299), Expect = 5.218e-151 Identity = 288/684 (42.11%), Postives = 406/684 (59.36%), Query Frame = 0
Query: 77 KNFEFCTSEPIWNAKQKVLIEFASNKDLVDALNFGFYMPPSGGRAGKFLDEQRTFKDYP--MDRTSGSLEFRYKRRIFRHLHLQDEKKLQKINTKKYRKKFFEHIYARNLPEMEKLLKKGLDPNFQDEKSGETPLTATAMLDDCMEMLKILIQYGSYMDFRTKAGKTALHNVAIIGKDVALKNLLDLGASPNYRDSKGLTPLYQSIQFGSNPLICELLLKEKSLLGITDFHGCEEIHQACKLGYVQHVEHLVFYGANVNAKTASGNTPLHICALENQESCARVLLFRGADRSTANYAQQTAYDVAILSNNLDVALLLNDFDPRNVTPFKHKPDYVERKRLATLTDGTRPPSQAISPQLSLDGSSIASGEGESETSSGRSSPVPLQKRLKATSTPANMHTLGLMRQRKASTGSLPETVEEHSESDEESEDDDQL------KPMKPMRTFSNAGVGTKRSPAPMRIAPKSQHVRTRLYASVPGRSFVAIKDYEAASQGELALKKGDSVEVLYVGEAGFWEGSVRGRAGWFPSACVQEV-----------KKGDSLRGKRTWLGGKKKSPVADIFAEGD-VPKPRVITLKKSDKQGFGFQMRGANSHLPHIDFQPSPQFPALQYIGEVDKGGVAEKAGLKPGDFVLELNHENVVNATHGYAVSLISGGGKSLTIKVITIAPVTSENG 740
K + P+W AKQ+VL A N L DALN+G + PPS GRAGKFLDE+R ++YP +D LEFRYKRR++ +L D+K+ K++TK KKF +++ + ++ +LL KGLDPNF D SGE PL+ A LD+ ++LK+L G+++DFRT+ G TA+H AL LLDLGASP+Y+DS+GLTPLY S G + L CELLL + + LGITD +G +EIHQAC+ G+VQH+EHL+FYGA++ A+ ASGNT LHICAL NQESCARVLLFRGA+R NY QTA+ VAI++ N ++A ++ +V PF+ P Y +R+RLA PS SP+ +S + +GE++ + +SP P + L H L L R L E + ++D+ES L + P P AP + + +LY++VPGR F+A+K + +GE+ L +G++V+VL +GE GFWEG+V+GR GWFP+ CV+EV ++ + R R + G S + + D V +V L+K D +GFGF +RGA + P +F P+P FPALQY+ VD GVA +AGL+ GDF++E+N NVV H V+LI GG L +KV+++ E+G
Sbjct: 22 KCLRLDPAAPVWAAKQRVLC--ALNHSLQDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQ-NLIDDKQFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDLLKVLKNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALGGGDALCCELLLHDHAQLGITDENGWQEIHQACRFGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQESCARVLLFRGANRDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFRETPSYAKRRRLAG-------PSGLASPRPLQRSASDINLKGEAQPA---ASPGPSLRSLP--------HQLLLQR--------LQEEKDRDRDADQESNISGPLAGRAGQSKISPSGPGGPGPAPGPGPAPPAPPAPPPRGPKRKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQHDTRPETREDRTKRLFRHYTVGSYDS----LTSHSDYVIDDKVAVLQKRDHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVALIRQGGNRLVMKVVSVTRKPEEDG 672
The following BLAST results are available for this feature:
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