TCONS_00007902-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007902-protein
Unique NameTCONS_00007902-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007902-protein ID=TCONS_00007902-protein|Name=TCONS_00007902-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MMSIKLVALCALLPAIFTIPGISINDMFAYGPNNGDTGNSYHGIDAAAFL
DGFETVDVPNNLPSVRWGGKDLGRRAFINFNGHITFGNNHRNQDPATIQN
LDASITAIFYPFYSDNDIRRPDGMLYFRLSTQASDLSLANTLIRGRNFVG
FTTRYCIIATWHKNKYYIGTGDKADPNRQQENTYQAALCVGDSDSHIIYH
YNEMNWDKSEDPDSSDSRIGWLVKGVTDSSLASWVSPYSGQTDAYASQAT
QSNVGVAGRWMRSTVAVGPCVNLADGLYQVSCQQYRECCGKAEQAVRTCP
VGTNFHPTLKRCIDTKNYNCGGAANLCDSFASNGNFADTSTTALDDYIRC
KNGIGHKLKCPFGIVFGSSAICN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004466XLOC_004466Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007902TCONS_00007902Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003886NIDO_dom
IPR002557Chitin-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0007160cell-matrix adhesion
GO:0006030chitin metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007160 cell-matrix adhesion
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003886NIDO domainSMARTSM00539ylk_9coord: 111..265
e-value: 1.3E-4
score: 21.1
IPR003886NIDO domainPFAMPF06119NIDOcoord: 182..261
e-value: 1.2E-7
score: 32.5
IPR003886NIDO domainPROSITEPS51220NIDOcoord: 111..263
score: 9.934
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 270..320
e-value: 8.5E-5
score: 22.6
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 328..373
e-value: 2.2E-4
score: 20.5
coord: 261..327
e-value: 4.4E-6
score: 26.0
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 324..373
score: 8.306
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 267..322
score: 8.877
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 275..322

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007902-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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