TCONS_00007817-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007817-protein
Unique NameTCONS_00007817-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007817-protein ID=TCONS_00007817-protein|Name=TCONS_00007817-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
MLSLQMRKTLASYRKRIPSLLERTICIGHTVQNKHTNLRQYAPLKDNQMK
YITNTMSSRYLTTTACKLGVNIRPHQSIPTRLAAEQLVRDMTEEERQKVM
TVLQDLEQEHSLEKGGQQEEPPTFNHLWLLAFANSIPFIGFGFFDNAIMI
LAGEYIDYTVGATLGISTMAAAAIGNMISDVAGIGLAGWVETLAYRFGFD
EPALTPAQMSMTQSRVACHFGRAIGIVIGCIIGMAPLAFISSKEHCEKEH
EKDEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004438XLOC_004438Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007817TCONS_00007817Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019537TMEM65
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableGENE3D1.20.1250.20coord: 53..255
e-value: 9.6E-4
score: 18.0
IPR019537Transmembrane protein 65PFAMPF10507TMEM65coord: 134..240
e-value: 2.0E-44
score: 149.9

Blast
[Close]
BLAST of TCONS_00007817-protein vs. Swiss-Prot (Human)
Match: TMM65 (Transmembrane protein 65 OS=Homo sapiens GN=TMEM65 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.975e-49
Identity = 83/182 (45.60%), Postives = 116/182 (63.74%), Query Frame = 0 
Query:   74 PHQSIPTRLAAEQLVRDMTEEERQKVMTVLQDLEQEHSLEKGGQQEE--PPTFNHLWLLAFANSIPFIGFGFFDNAIMILAGEYIDYTVGATLGISTMAAAAIGNMISDVAGIGLAGWVETLAYRFGFDEPALTPAQMSMTQSRVACHFGRAIGIVIGCIIGMAPLAFISSKEHCEKEHEKD 253
            P +++ T   A   +  +   ER     +L++L +  S+    ++ E  PPT   L  +   N+IPFIGFGF DNAIMI+AG +I+ ++G  LGISTMAAAA+GN++SD+AG+GLAG+VE LA R G   P LTP Q+ M Q+R++ H G+A+G+ IGCI+GM PL F    E  EK   K 
Sbjct:   62 PMEALNTAQGARDFIYSLHSTERS---CLLKELHRFESIAIAQEKLEAPPPTPGQLRYVFIHNAIPFIGFGFLDNAIMIVAGTHIEMSIGIILGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQVDMWQTRLSTHLGKAVGVTIGCILGMFPLIFFGGGEEDEKLETKS 240
The following BLAST results are available for this feature:
BLAST of TCONS_00007817-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMM653.975e-4945.60Transmembrane protein 65 OS=Homo sapiens GN=TMEM65... [more]
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